RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 TVP23AA6NH52 213 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 JRKO75564 520 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 MT-ND4P03905 459 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 GGT2P36268 569 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 LEG1Q6P5S2 330 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 WDR53Q7Z5U6 358 aaPredicted RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 PCNPQ8WW12 178 aaKnown RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 SLC28A3Q9HAS3 691 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 CACNG2Q9Y698 323 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 ZNF701M0R085 212 aaPredicted RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 HCRTR2O43614 444 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 RFPL3O75679 317 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 SLC16A8O95907 504 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 TFP02787 698 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 HOXC5Q00444 222 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 PTPRRQ15256 657 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 CHRFAM7AQ494W8 412 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 PIP5KL1Q5T9C9 394 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 CYB561A3Q8NBI2 242 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 MMABQ96EY8 250 aaPredicted RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 PRDM9Q9NQV7 894 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 TAS2R16Q9NYV7 291 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 A0A0A6YYH2 397 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 HMX3A6NHT5 357 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 A6NJ64 397 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 FRKP42685 505 aaPredicted RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 TTLL10Q6ZVT0 673 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 LRRC25Q8N386 305 aaPredicted RBP14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 TEX26Q8N6G2 289 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 GDPD1Q8N9F7 314 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 CHST14Q8NCH0 376 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 LMX1AQ8TE12 382 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 SGCDQ92629 289 aa14.57□□□□□ -0.08
SHROOM4-201ENST00000289292 CPED1A4D0V7 1026 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 FGF18O76093 207 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 PITPNBP48739 271 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 TAS2R38P59533 333 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 UGT3A2Q3SY77 523 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 REM2Q8IYK8 340 aaPredicted RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 LSMEM2Q8N112 164 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 MACROD1Q9BQ69 325 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 METTL7AQ9H8H3 244 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 SDHAF3Q9NRP4 125 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 GABRQQ9UN88 632 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 IGKV6D-21A0A0A0MT36 114 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ADAP00813 363 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 HSD3B1P14060 373 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 HSD3B2P26439 372 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 INHBCP55103 352 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 WNT4P56705 351 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ACTC1P68032 377 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ACTA1P68133 377 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 PUS10Q3MIT2 529 aaKnown RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 RTP2Q5QGT7 225 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 PLAG1Q6DJT9 500 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ZNF534Q76KX8 674 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ZNF283Q8N7M2 679 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 TMEM102Q8N9M5 508 aaPredicted RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 OR5W2Q8NH69 310 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 TREX1Q9NSU2 369 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 EDIL3O43854 480 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 AHSA1O95433 338 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 RPS17P08708 135 aaKnown RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 UCHL1P09936 223 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 H2BFMP0C1H6 154 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ITGAMP11215 1152 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 S1PR1P21453 382 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ART1P52961 327 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 GHRHRQ02643 423 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 GRIN2CQ14957 1233 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 C3orf58Q8NDZ4 430 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 GGHQ92820 318 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ELMOD3Q96FG2 381 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 DPH7Q9BTV6 452 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ALG8Q9BVK2 526 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 EPHA6Q9UF33 1036 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 OR1A2Q9Y585 309 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 LOC105369274A0A096LPK9 316 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 IGKV6-21A0A0C4DH24 114 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 SNU13P55769 128 aaKnown RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 RING1Q06587 406 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 SNTA1Q13424 505 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 CTSL3PQ5NE16 218 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ARSKQ6UWY0 536 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 OR4N4Q8N0Y3 316 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 BEST4Q8NFU0 473 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 OR2T35Q8NGX2 323 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 ZNF689Q96CS4 500 aaPredicted RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 TEX10Q9NXF1 929 aaPredicted RBP14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 NPIPA5A0A0B4J1W7 369 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 A0A1W2PQ09 198 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 NPIPA7E9PJI5 369 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 NPIPA8P0DM63 369 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 BMP4P12644 408 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 GRHL2Q6ISB3 625 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 SCD5Q86SK9 330 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 MUL1Q969V5 352 aa14.56□□□□□ -0.08
SHROOM4-201ENST00000289292 IGLON5A6NGN9 336 aa14.55□□□□□ -0.08
SHROOM4-201ENST00000289292 SLC22A31A6NKX4 558 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms