RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 NTRK2Q16620 822 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 FAM174BQ3ZCQ3 159 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 NATD1Q8N6N6 113 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 NUP43Q8NFH3 380 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 OR4N2Q8NGD1 307 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 FAM120BQ96EK7 910 aaKnown RBP18.3■□□□□ 0.52
TIMP4-201ENST00000287814 GIMAP5Q96F15 307 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 SGCZQ96LD1 299 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 CCDC28BQ9BUN5 200 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 NPHS2Q9NP85 383 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 TIMMDC1Q9NPL8 285 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 SDR39U1Q9NRG7 319 aaPredicted RBP18.3■□□□□ 0.52
TIMP4-201ENST00000287814 DCTN4Q9UJW0 460 aa18.3■□□□□ 0.52
TIMP4-201ENST00000287814 NBASA2RRP1 2371 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 PINLYPA6NC86 204 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 TO15178 435 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 POLR3GO15318 223 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ABCB1P08183 1280 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 KIR3DL1P43629 444 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ZFP36L2P47974 494 aaKnown RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 CLNS1AP54105 237 aaKnown RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ZNF155Q12901 538 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 RPS6KA2Q15349 733 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 GSTA3Q16772 222 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 PDCD4Q53EL6 469 aaKnown RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ZNF324BQ6AW86 544 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ANKRD46Q86W74 232 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 SLC44A2Q8IWA5 706 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 CPSF7Q8N684 471 aaKnown RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 GOLM1Q8NBJ4 401 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 HSPBAP1Q96EW2 488 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 CCDC134Q9H6E4 229 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 EQTNQ9NQ60 294 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 FGFR1OP2Q9NVK5 253 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 CHCHD2Q9Y6H1 151 aaPredicted RBP18.29■□□□□ 0.52
TIMP4-201ENST00000287814 RELNP78509 3460 aa18.29■□□□□ 0.52
TIMP4-201ENST00000287814 ASPDHA6ND91 283 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 RNASET2O00584 256 aaKnown RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 ACOX3O15254 700 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 EMC8O43402 210 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 PEX1O43933 1283 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 NRG3P56975 720 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 FOXK1P85037 733 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 INAQ16352 499 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 RNFT1Q5M7Z0 435 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 CGB2Q6NT52 195 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 PAOXQ6QHF9 649 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 FAM13CQ8NE31 585 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 OR9I1Q8NGQ6 314 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 PAQR8Q8TEZ7 354 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 FAR1Q8WVX9 515 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 OMA1Q96E52 524 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 C16orf58Q96GQ5 468 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 FRMD6Q96NE9 622 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 C3orf14Q9HBI5 128 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 PROK2Q9HC23 129 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 KLF13Q9Y2Y9 288 aaPredicted RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 SNX8Q9Y5X2 465 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 SHANK1Q9Y566 2161 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 CFLARO15519 480 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 SLC22A3O75751 556 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 MST1P26927 711 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 S100A3P33764 101 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 PIGAP37287 484 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 RFC3P40938 356 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 MAP3K8P41279 467 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 MEOX1P50221 254 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 GAB1Q13480 694 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 SLC22A10Q63ZE4 541 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 FAM180AQ6UWF9 173 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 SZRD1Q7Z422 152 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 CLEC4FQ8N1N0 589 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 HOXB13Q92826 284 aaPredicted RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 TMBIM1Q969X1 311 aa18.28■□□□□ 0.52
TIMP4-201ENST00000287814 LMF2Q9BU23 707 aaKnown RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 ZCCHC3Q9NUD5 404 aaKnown RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 CNOT11Q9UKZ1 510 aaKnown RBP18.28■□□□□ 0.52
TIMP4-201ENST00000287814 NUP214P35658 2090 aaPredicted RBP18.27■□□□□ 0.52
TIMP4-201ENST00000287814 PRSS51A0A1B0GVH4 220 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 PPM1BO75688 479 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 CNR1P21554 472 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 CCT3P49368 545 aaKnown RBP18.27■□□□□ 0.52
TIMP4-201ENST00000287814 PLCXD2Q0VAA5 305 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 SF3A3Q12874 501 aaKnown RBP eCLIP18.27■□□□□ 0.528e-9■■■■■ 34.7
TIMP4-201ENST00000287814 DPY19L1Q2PZI1 675 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 DND1Q8IYX4 353 aaKnown RBP18.27■□□□□ 0.52
TIMP4-201ENST00000287814 BCORP1Q8N888 145 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 YIPF4Q9BSR8 244 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 ZIM2Q9NZV7 527 aa18.27■□□□□ 0.52
TIMP4-201ENST00000287814 KLRC4-KLRK1H3BQV0 150 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 UGT2B11O75310 529 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 HMGN2P05204 90 aaKnown RBP18.26■□□□□ 0.51
TIMP4-201ENST00000287814 PGRP06401 933 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 VIMP08670 466 aaKnown RBP18.26■□□□□ 0.51
TIMP4-201ENST00000287814 CD1EP15812 388 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 NAGAP17050 411 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 DNASE1L1P49184 302 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 EXOSC6Q5RKV6 272 aaKnown RBP18.26■□□□□ 0.51
TIMP4-201ENST00000287814 PRAMEF20Q5VT98 475 aa18.26■□□□□ 0.51
TIMP4-201ENST00000287814 BICRALQ6AI39 1079 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms