RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZC3H12DA2A288 527 aaKnown RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 HYAL3O43820 417 aaPredicted RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 ATG12O94817 140 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 SPDEFO95238 335 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 SLC6A4P31645 630 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 PUM1Q14671 1186 aaKnown RBP eCLIP12.12□□□□□ -0.47
HERC6-202ENST00000273960 RTP2Q5QGT7 225 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ARL9Q6T311 187 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 TSPAN33Q86UF1 283 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 FAM181AQ8N9Y4 354 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 OR8J1Q8NGP2 316 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 CSGALNACT1Q8TDX6 532 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 SAMD11Q96NU1 681 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 SECISBP2Q96T21 854 aaKnown RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 ORAI3Q9BRQ5 295 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 FXYD6Q9H0Q3 95 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 P2RY12Q9H244 342 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 OR51B5Q9H339 312 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 TSC2P49815 1807 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 TRAV20A0A0B4J274 112 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 OR6C74A6NCV1 312 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 KHNYNO15037 678 aaKnown RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 FRS3O43559 492 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ZNF623O75123 536 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 EPHX1P07099 455 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 H2AFB2P0C5Z0 115 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 PTHLHP12272 177 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 PCGF2P35227 344 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 XCR1P46094 333 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 SLC11A1P49279 550 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 RHOAP61586 193 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 HYAL4Q2M3T9 481 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ELP2Q6IA86 826 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ZNF582Q96NG8 517 aaPredicted RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 YIPF4Q9BSR8 244 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 MCOLN1Q9GZU1 580 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 FBXO44Q9H4M3 255 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 CXXC1Q9P0U4 656 aaPredicted RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 TFP02787 698 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 C1SP09871 688 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ANKRD34CP0C6C1 535 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 CPEP16870 476 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 PBLDP30039 288 aaPredicted RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 SLC3A1Q07837 685 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 OR4K3Q96R72 315 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ADAT1Q9BUB4 502 aaKnown RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 GSDMCQ9BYG8 508 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 GHITMQ9H3K2 345 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 FAM120CQ9NX05 1096 aaKnown RBP12.12□□□□□ -0.47
HERC6-202ENST00000273960 ERVK-19Q9WJR5 959 aa12.12□□□□□ -0.47
HERC6-202ENST00000273960 ALPK2Q86TB3 2170 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 SCAMP2O15127 329 aaKnown RBP12.11□□□□□ -0.47
HERC6-202ENST00000273960 RD3LP0DJH9 198 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 HSD3B1P14060 373 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 CD22P20273 847 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 RPS13P62277 151 aaKnown RBP12.11□□□□□ -0.47
HERC6-202ENST00000273960 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 ETFDHQ16134 617 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 Q6ZTK2 550 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 SERPINA12Q8IW75 414 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 NPAS1Q99742 590 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 PLA2G12AQ9BZM1 189 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 IL26Q9NPH9 171 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 CNIH4Q9P003 139 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 IL17CQ9P0M4 197 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 MGAT4CQ9UBM8 478 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 ZNF69Q9UC07 566 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 GPR160Q9UJ42 338 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 LOC285556D6RIA3 1793 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 ANXA2P2A6NMY6 339 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 ADAM12O43184 909 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 VEGFCP49767 419 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 PRKAG1P54619 331 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 HSD17B12Q53GQ0 312 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 PLA1AQ53H76 456 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 TRIM40Q6P9F5 258 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 SLC7A13Q8TCU3 470 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
HERC6-202ENST00000273960 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 CUEDC1Q9NWM3 386 aaPredicted RBP12.11□□□□□ -0.47
HERC6-202ENST00000273960 TAS2R7Q9NYW3 318 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 PCDHB8Q9UN66 801 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 ZNF175Q9Y473 711 aa12.11□□□□□ -0.47
HERC6-202ENST00000273960 GLYATL1P3A0A0U1RQE8 302 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 OR2AG2A6NM03 316 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 SOD1P00441 154 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 CBR1P16152 277 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 CCR7P32248 378 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 ZNF683Q8IZ20 524 aa12.1□□□□□ -0.47
HERC6-202ENST00000273960 CARNMT1Q8N4J0 409 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms