RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SNX4O95219 450 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CLDN9O95484 217 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 IL2RAP01589 272 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ATP1B1P05026 303 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 RPS17P08708 135 aaKnown RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 PCSK2P16519 638 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 TSPAN8P19075 237 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 NT5EP21589 574 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 DNASE1P24855 282 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CTSSP25774 331 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 PIK3R1P27986 724 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CCKARP32238 428 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 FEN1P39748 380 aaKnown RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 STARP49675 285 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 LHX2P50458 406 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 GAS1P54826 345 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CLDN15P56746 228 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 MRPS35P82673 323 aaKnown RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 SORDQ00796 357 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 SLC7A5Q01650 507 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 MAP4K2Q12851 820 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 PRSS53Q2L4Q9 553 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 FAM83EQ2M2I3 478 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 GGTA1PQ4G0N0 100 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 FRG2Q64ET8 278 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 SLC48A1Q6P1K1 146 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ANGPTL8Q6UXH0 198 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 NPSR1Q6W5P4 371 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 Q71RC1 249 aaPredicted RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 ZNF572Q7Z3I7 529 aaPredicted RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 COMMD6Q7Z4G1 85 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CHDHQ8NE62 594 aaPredicted RBP8.13□□□□□ -1.11
TPM3-201ENST00000271850 C7orf57Q8NEG2 295 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OR7G1Q8NGA0 311 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OR4F6Q8NGB9 312 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OR4K14Q8NGD5 310 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OR52R1Q8NGF1 315 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ZPLD1Q8TCW7 415 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 TM4SF18Q96CE8 201 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OMA1Q96E52 524 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 FRG2BQ96QU4 278 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 HBEGFQ99075 208 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 FUT8Q9BYC5 575 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 OR2B2Q9GZK3 357 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CALHM2Q9HA72 323 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 SERHLQ9NQF3 203 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 GALNT8Q9NY28 637 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 NINJ2Q9NZG7 142 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 XPR1Q9UBH6 696 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 TRPS1Q9UHF7 1281 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ADAM29Q9UKF5 820 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 MAPRE3Q9UPY8 281 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 ANGPTL3Q9Y5C1 460 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 WIF1Q9Y5W5 379 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 TLN2Q9Y4G6 2542 aa8.13□□□□□ -1.11
TPM3-201ENST00000271850 CCDC189A1A4V9 331 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 TUBAL3A6NHL2 446 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 CLCA1A8K7I4 914 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 EEF1E1-BLOC1S5C9J1V9 151 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 STX16-NPEPL1H3BU86 382 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 STX16O14662 325 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 TO15178 435 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 EEF1E1O43324 174 aaKnown RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 TGM6O95932 706 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 IL18BPO95998 194 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 PDYNP01213 254 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 RAF1P04049 648 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 TMIGD3P0DMS9 266 aaPredicted RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 CPN1P15169 458 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 CHN1P15882 459 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 LOXP28300 417 aaPredicted RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 ECHS1P30084 290 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 OPRM1P35372 400 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 MASP1P48740 699 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 CLDN18P56856 261 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 CORO7P57737 925 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 B3GALT5-AS1P59052 145 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 HMGCS1Q01581 520 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 ZNF628Q5EBL2 1059 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 METTL2BQ6P1Q9 378 aaKnown RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 PM20D2Q8IYS1 436 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 GCNT2Q8N0V5 402 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 OR1J4Q8NGS1 313 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 ZNF483Q8TF39 744 aaPredicted RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 REPS1Q96D71 796 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 HSPBAP1Q96EW2 488 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 UCN2Q96RP3 112 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 SERPINI1Q99574 410 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 CENPKQ9BS16 269 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 OSBPL11Q9BXB4 747 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 RTN4RQ9BZR6 473 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 BRINP2Q9C0B6 783 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 VPS11Q9H270 941 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 ACSS3Q9H6R3 686 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 PRM3Q9NNZ6 103 aa8.12□□□□□ -1.11
TPM3-201ENST00000271850 MTRF1LQ9UGC7 380 aaKnown RBP8.12□□□□□ -1.11
TPM3-201ENST00000271850 FOXD3Q9UJU5 478 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms