RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 DUSP18Q8NEJ0 188 aa25.89■■□□□ 1.73
CBX4-201ENST00000269397 ZCCHC3Q9NUD5 404 aaKnown RBP25.89■■□□□ 1.73
CBX4-201ENST00000269397 SLC9A8Q9Y2E8 581 aa25.89■■□□□ 1.73
CBX4-201ENST00000269397 MEN1O00255 615 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 HLA-DQB1P01920 261 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 SYN1P17600 705 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 RAET1EQ8TD07 263 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 TEKT2Q9UIF3 430 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 A0A1B0GVC2 190 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 A6NIN4 97 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 H7BY64 318 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 CRYZL1O95825 349 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 FGF9P31371 208 aaPredicted RBP25.88■■□□□ 1.73
CBX4-201ENST00000269397 SLC1A3P43003 542 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 AGFG1P52594 562 aaKnown RBP25.88■■□□□ 1.73
CBX4-201ENST00000269397 CLDN20P56880 219 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 TNK1Q13470 666 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 SLC30A6Q6NXT4 461 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 CD300LDQ6UXZ3 194 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 ELMOD2Q8IZ81 293 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 MRGPRX3Q96LB0 322 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 PRAP1Q96NZ9 151 aa25.88■■□□□ 1.73
CBX4-201ENST00000269397 DENND4CQ5VZ89 1909 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 GABRPO00591 440 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 PROM1O43490 865 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 ICMTO60725 284 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 CHRM4P08173 479 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 OR3A3P47888 321 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 RRAS2P62070 204 aaPredicted RBP25.87■■□□□ 1.73
CBX4-201ENST00000269397 CSTF1Q05048 431 aaKnown RBP25.87■■□□□ 1.73
CBX4-201ENST00000269397 PLCZ1Q86YW0 608 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 IRF7Q92985 503 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 TCEAL4Q96EI5 215 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 FAM46AQ96IP4 442 aaKnown RBP25.87■■□□□ 1.73
CBX4-201ENST00000269397 MS4A8Q9BY19 250 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 PCDHGB7Q9Y5F8 929 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 CDH11P55287 796 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 MINDY4Q4G0A6 757 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 ENTPD8Q5MY95 495 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 ASB18Q6ZVZ8 466 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 LIX1LQ8IVB5 337 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 NFKBIL1Q9UBC1 381 aaPredicted RBP25.87■■□□□ 1.73
CBX4-201ENST00000269397 DKK3Q9UBP4 350 aa25.87■■□□□ 1.73
CBX4-201ENST00000269397 TRDV1A0A1B0GX56 115 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 NDUFA9Q16795 377 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 TIGD3Q6B0B8 471 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 CD200R1LQ6Q8B3 271 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 SLC37A3Q8NCC5 494 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 OTULINQ96BN8 352 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 ZC3HAV1LQ96H79 300 aaKnown RBP25.86■■□□□ 1.73
CBX4-201ENST00000269397 ART5Q96L15 291 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 RNF32Q9H0A6 362 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 GLIPR2Q9H4G4 154 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 TDP1Q9NUW8 608 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 TCF20Q9UGU0 1960 aaKnown RBP25.86■■□□□ 1.73
CBX4-201ENST00000269397 CCL16O15467 120 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 C17orf64Q86WR6 236 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 ZNF485Q8NCK3 441 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 BBS1Q8NFJ9 593 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 MARVELD1Q9BSK0 173 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 HDHD2Q9H0R4 259 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 NIPAL2Q9H841 368 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 SLC23A1Q9UHI7 598 aa25.86■■□□□ 1.73
CBX4-201ENST00000269397 EXOSC1Q9Y3B2 195 aaKnown RBP25.86■■□□□ 1.73
CBX4-201ENST00000269397 KIF26AQ9ULI4 1882 aaPredicted RBP25.85■■□□□ 1.73
CBX4-201ENST00000269397 FAM170BA6NMN3 283 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 INMT-MINDY4F8WBC2 141 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 HRO43593 1189 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 UBXN7O94888 489 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 ACADLP28330 430 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 PPP2R1BP30154 601 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 GPR1P46091 355 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 ZNF750Q32MQ0 723 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 ARIH2OSQ8N7S6 290 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 OR4M2Q8NGB6 313 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 HCAR2Q8TDS4 363 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 DTD2Q96FN9 168 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 CPSF4LA6NMK7 179 aaKnown RBP25.85■■□□□ 1.73
CBX4-201ENST00000269397 RB1P06400 928 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 RAB8AP61006 207 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 LASP1Q14847 261 aaKnown RBP25.85■■□□□ 1.73
CBX4-201ENST00000269397 IL20RBQ6UXL0 311 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 DNAJC5GQ8N7S2 189 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 SUN5Q8TC36 379 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 ZG16BQ96DA0 208 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 PRRC1Q96M27 445 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 MRPS18AQ9NVS2 196 aaKnown RBP25.85■■□□□ 1.73
CBX4-201ENST00000269397 KCNE3Q9Y6H6 103 aa25.85■■□□□ 1.73
CBX4-201ENST00000269397 LANCL1O43813 399 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 ORC5O43913 435 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 ELK1P19419 428 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 NNMTP40261 264 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 FUT5Q11128 374 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 ZNF155Q12901 538 aaPredicted RBP25.84■■□□□ 1.73
CBX4-201ENST00000269397 MACROD1Q9BQ69 325 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 MYO10Q9HD67 2058 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 A0A1W2PQ72 361 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 ZSCAN5BA6NJL1 495 aa25.84■■□□□ 1.73
CBX4-201ENST00000269397 GTPBP1O00178 669 aaKnown RBP25.84■■□□□ 1.73
CBX4-201ENST00000269397 ALDH1A1P00352 501 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms