RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 UBAP1Q9NZ09 502 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 C3orf18Q9UK00 162 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 SAMHD1Q9Y3Z3 626 aaKnown RBP14.36□□□□□ -0.11
COPS3-201ENST00000268717 ENPP4Q9Y6X5 453 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 IGF2RP11717 2491 aa14.36□□□□□ -0.11
COPS3-201ENST00000268717 A8MVJ9 347 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 LDB3O75112 727 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 RFPL3O75679 317 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 OR2B3O76000 313 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 TNFAIP8O95379 198 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ALBP02768 609 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 IFNW1P05000 195 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 RHCEP18577 417 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ACP1P24666 158 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 XCR1P46094 333 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 RAD23AP54725 363 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 HSD17B7P56937 341 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ADARB1P78563 741 aaKnown RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 MGAT2Q10469 447 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 MAP4K2Q12851 820 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 CCDC157Q569K6 752 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 RPS26P11Q5JNZ5 115 aaPredicted RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 TMEM179BQ7Z7N9 219 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ZNF605Q86T29 641 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ST13P4Q8IZP2 240 aaPredicted RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 SHISA5Q8N114 240 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ADAMTS15Q8TE58 950 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 PROX1Q92786 737 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 FKBP10Q96AY3 582 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 C16orf58Q96GQ5 468 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ZNF578Q96N58 590 aaPredicted RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 STACQ99469 402 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 PELOQ9BRX2 385 aaKnown RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 SPRTNQ9H040 489 aaPredicted RBP14.35□□□□□ -0.11
COPS3-201ENST00000268717 RUBCNLQ9H714 662 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 ZNF696Q9H7X3 374 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 FANCEQ9HB96 536 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 DUSP22Q9NRW4 184 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 PNPLA3Q9NST1 481 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 CUTCQ9NTM9 273 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 MAT2BQ9NZL9 334 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 SEC14L3Q9UDX4 400 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 KLHL3Q9UH77 587 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 CDC14AQ9UNH5 594 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 SATB2Q9UPW6 733 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 MSRB2Q9Y3D2 182 aa14.35□□□□□ -0.11
COPS3-201ENST00000268717 TMEM150CB9EJG8 249 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 COQ9O75208 318 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 AK1P00568 194 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 FESP07332 822 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 CHRM4P08173 479 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 UBTFL6P0CB48 400 aaPredicted RBP14.34□□□□□ -0.11
COPS3-201ENST00000268717 CDK4P11802 303 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 CKMT1AP12532 417 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 HMGA2P52926 109 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 ILKQ13418 452 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 DUSP7Q16829 419 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 TTC23Q5W5X9 447 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 AP1ARQ63HQ0 302 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 DHRS13Q6UX07 377 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 SLC44A2Q8IWA5 706 aaPredicted RBP14.34□□□□□ -0.11
COPS3-201ENST00000268717 GPR135Q8IZ08 494 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 CDRT4Q8N9R6 151 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 SMYD1Q8NB12 490 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 PMM1Q92871 262 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 MMABQ96EY8 250 aaPredicted RBP14.34□□□□□ -0.11
COPS3-201ENST00000268717 COL21A1Q96P44 957 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 OR1F2PQ96R84 312 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 PSD2Q9BQI7 771 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 PIGUQ9H490 435 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 HCN3Q9P1Z3 774 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 KCND3Q9UK17 655 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 ORC6Q9Y5N6 252 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
COPS3-201ENST00000268717 PRAMEF25A6NGN4 478 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 SYT5O00445 386 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 SNAP29O95721 258 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 CPNE6O95741 557 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 RECKO95980 971 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 GUSBP08236 651 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 NT5EP21589 574 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 PTGER1P34995 402 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 MAP3K8P41279 467 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 DAB2P98082 770 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 SERTAD2Q14140 314 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 KDM4DQ6B0I6 523 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 KRT80Q6KB66 452 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 FAHD1Q6P587 224 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 TMEM154Q6P9G4 183 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 CHDHQ8NE62 594 aaPredicted RBP14.33□□□□□ -0.11
COPS3-201ENST00000268717 GPR32P1Q8NGA4 272 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 OR4D9Q8NGE8 314 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 PINK1Q9BXM7 581 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 AMBRA1Q9C0C7 1298 aa14.33□□□□□ -0.11
COPS3-201ENST00000268717 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms