RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 UGT2A3Q6UWM9 527 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 OLIG3Q7RTU3 272 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 C16orf62Q7Z3J2 963 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 CARM1Q86X55 608 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 CDS1Q92903 461 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 RIT1Q92963 219 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 RBM18Q96H35 190 aaKnown RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 ZNF578Q96N58 590 aaPredicted RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 DGAT2Q96PD7 388 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 PELOQ9BRX2 385 aaKnown RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 ADI1Q9BV57 179 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 ANKRD60Q9BZ19 345 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 REEP1Q9H902 201 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 SMURF2Q9HAU4 748 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 ZNF304Q9HCX3 659 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 NECTIN3Q9NQS3 549 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 UBAP1Q9NZ09 502 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 SH3GLB1Q9Y371 365 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 SAMHD1Q9Y3Z3 626 aaKnown RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 U3KQV3 271 aa15.27■□□□□ 0.03
TPM1-201ENST00000267996 ASCC3Q8N3C0 2202 aaKnown RBP15.27■□□□□ 0.03
TPM1-201ENST00000267996 A8MVJ9 347 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 ADAMDEC1O15204 470 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 COQ9O75208 318 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 DNAJB5O75953 348 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 ALOX5P09917 674 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 MAOAP21397 527 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 FBLP22087 321 aaKnown RBP15.26■□□□□ 0.03
TPM1-201ENST00000267996 CHRNEQ04844 493 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 SLC36A3Q495N2 470 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 CYP27C1Q4G0S4 372 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 RHBDD2Q6NTF9 364 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 QSOX2Q6ZRP7 698 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 ZNF605Q86T29 641 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 SLC9A6Q92581 669 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 PROX1Q92786 737 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 BARD1Q99728 777 aaKnown RBP15.26■□□□□ 0.03
TPM1-201ENST00000267996 SATB2Q9UPW6 733 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 FER1L5A0AVI2 2057 aa15.26■□□□□ 0.03
TPM1-201ENST00000267996 IGKV3D-11A0A0A0MRZ8 115 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 OR2W5A6NFC9 320 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 SOX30O94993 753 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 NKX2-2O95096 273 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 SNAP29O95721 258 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 IFNW1P05000 195 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 THRBP10828 461 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 RHCEP18577 417 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 RRM2P31350 389 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 HMGA2P52926 109 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 PDX1P52945 283 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 ADARB1P78563 741 aaKnown RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 FUT7Q11130 342 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 FRRS1Q6ZNA5 592 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 DHRSXQ8N5I4 330 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 RCBTB1Q8NDN9 531 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 C7orf57Q8NEG2 295 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 OR52R1Q8NGF1 315 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 OR4C15Q8NGM1 316 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 GFM1Q96RP9 751 aaKnown RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 SDF2Q99470 211 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 LMF2Q9BU23 707 aaKnown RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 PINK1Q9BXM7 581 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 TMEFF2Q9UIK5 374 aaPredicted RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 LYVE1Q9Y5Y7 322 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 R4GN57 208 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 NINQ8N4C6 2090 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 LNP1A1A4G5 178 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 MAGEA13PA6NCF6 341 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 D6RAR5 112 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 H0YAE9 185 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 SYT5O00445 386 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 EPPINO95925 133 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 LGI1O95970 557 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 GP1BAP07359 652 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 PRKACGP22612 351 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 CAPGP40121 348 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 EMDP50402 254 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 ARHGDIAP52565 204 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 NUBP1P53384 320 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 TRA2AQ13595 282 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM1-201ENST00000267996 GK3PQ14409 553 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 MLIPQ5VWP3 458 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 ANKRD34AQ69YU3 496 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 COMTD1Q86VU5 262 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 OR4D11Q8NGI4 311 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 CNDP2Q96KP4 475 aaKnown RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 CNBD2Q96M20 576 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 OR6C1Q96RD1 312 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 PIP5K1AQ99755 562 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 ZNF350Q9GZX5 532 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 SAP130Q9H0E3 1048 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 SYNDIG1Q9H7V2 258 aa15.25■□□□□ 0.03
TPM1-201ENST00000267996 MTHFD2LQ9H903 347 aaPredicted RBP15.25■□□□□ 0.03
TPM1-201ENST00000267996 NUP210LQ5VU65 1888 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 FCMRO60667 390 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 LDOC1O95751 146 aaPredicted RBP15.24■□□□□ 0.03
TPM1-201ENST00000267996 ONECUT2O95948 504 aa15.24■□□□□ 0.03
TPM1-201ENST00000267996 AK1P00568 194 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms