RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TREX2Q9BQ50 279 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 TRIM2Q9C040 744 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 NUAK2Q9H093 628 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 DDX31Q9H8H2 851 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 CXorf21Q9HAI6 301 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 RNF215Q9Y6U7 377 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 HCN1O60741 890 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 ARAFP10398 606 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 CSNK2BP67870 215 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 HOXC5Q00444 222 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 NPTX1Q15818 432 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 CBLL1Q75N03 491 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 DTNBP1Q96EV8 351 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 RPL36Q9Y3U8 105 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
PDLIM2-201ENST00000265810 TP53I11O14683 189 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SPINT1O43278 529 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GLB1P16278 677 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 BSGP35613 385 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GINS1Q14691 196 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC36A3Q495N2 470 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ZNF385BQ569K4 471 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 DCST2Q5T1A1 773 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 FRMPD2BQ6IN97 320 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ABI3BPQ7Z7G0 1075 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GPBAR1Q8TDU6 330 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 KLHL6Q8WZ60 621 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 RDH12Q96NR8 316 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ARRDC1-AS1Q9H2J1 176 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ANKRA2Q9H9E1 313 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 CD300AQ9UGN4 299 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 MAGED1Q9Y5V3 778 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 CDC14CA4D256 554 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 EFCAB9A8MZ26 197 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ACOT8O14734 319 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 MITFO75030 526 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 RBMS1P29558 406 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GAB1Q13480 694 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 HLA-BQ31612 363 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 TMPRSS11AQ6ZMR5 421 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SATL1Q86VE3 508 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SLC5A8Q8N695 610 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 OR10H4Q8NGA5 316 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 PTGES2Q9H7Z7 377 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 MYO10Q9HD67 2058 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ZNF749O43361 778 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ACPPP15309 386 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GARNL3Q5VVW2 1013 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 NANOGNBQ7Z5D8 188 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 C1orf210Q8IVY1 113 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ADGRF3Q8IZF5 1079 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 OR4K5Q8NGD3 323 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 EFHD2Q96C19 240 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SPRTNQ9H040 489 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 H3BNX3 289 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 AHSA1O95433 338 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 GPX2P18283 190 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ACVR2AP27037 513 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 CHRNEQ04844 493 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ZNF354BQ96LW1 612 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 ABCD2Q9UBJ2 740 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 BTBD3Q9Y2F9 522 aa13.59□□□□□ -0.23
PDLIM2-201ENST00000265810 NUP214P35658 2090 aaPredicted RBP13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 WASHC1A8K0Z3 465 aa13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 OAFQ86UD1 273 aa13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 TBX5Q99593 518 aa13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 AGPAT4Q9NRZ5 378 aa13.58□□□□□ -0.23
PDLIM2-201ENST00000265810 PSMA3P25788 255 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC9A3P48764 834 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF41P51814 821 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 NPRL3Q12980 569 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 RBM48Q5RL73 367 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF619Q8N2I2 560 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 TMCO6Q96DC7 493 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ADOQ96SZ5 270 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ULBP3Q9BZM4 244 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 CDC40O60508 579 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 WISP3O95389 354 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 GKN3PP0CG01 181 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 MAOAP21397 527 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ELK4P28324 431 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 GAB4Q2WGN9 574 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 PAQR7Q86WK9 346 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 MCEMP1Q8IX19 187 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms