RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 UXTQ9UBK9 157 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 SLC6A5Q9Y345 797 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 RALGAPA2Q2PPJ7 1873 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PLSCR5A0PG75 271 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 OR6C68A6NDL8 312 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 TAPBPO15533 448 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PCDH7O60245 1069 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 ZNF806P0C7X5 589 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 CD8BP10966 210 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 OR1D2P34982 312 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 SCNN1AP37088 669 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 CDC42P60953 191 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 SNRPEP62304 92 aaKnown RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 GUCA2BQ16661 112 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PTPRNQ16849 979 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 Q3ZCU0 254 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 TMEM255AQ5JRV8 349 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 C9orf152Q5JTZ5 239 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 RTP2Q5QGT7 225 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 GCNT6Q5T4J0 391 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 OR5M10Q6IEU7 315 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 TAC4Q86UU9 113 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PIANPQ8IYJ0 282 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PHOSPHO1Q8TCT1 267 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 ASZ1Q8WWH4 475 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PGAP3Q96FM1 320 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 ERMAPQ96PL5 475 aaPredicted RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 NLNQ9BYT8 704 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 LRTM1Q9HBL6 345 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 SEC14L3Q9UDX4 400 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 RPS6KA6Q9UK32 745 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 PDCD11Q14690 1871 aaKnown RBP8.29□□□□□ -1.08
VAPB-201ENST00000265619 SCN5AQ14524 2016 aa8.29□□□□□ -1.08
VAPB-201ENST00000265619 POM121BA6NF01 834 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SULT1B1O43704 296 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SNAPINO95295 136 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SOD1P00441 154 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CPEP16870 476 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 HOXC8P31273 242 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ATP5C1P36542 298 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 MC2RQ01718 297 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 TNFRSF17Q02223 184 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OC90Q02509 493 aaPredicted RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 SPIN4Q56A73 249 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SEZ6L2Q6UXD5 910 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 QSOX2Q6ZRP7 698 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SERPINA11Q86U17 422 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 MCATQ8IVS2 390 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 TCEANCQ8N8B7 351 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OR52I1Q8NGK6 324 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 FBXO32Q969P5 355 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ACPTQ9BZG2 426 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CD93Q9NPY3 652 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 KCNK7Q9Y2U2 307 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 PLXNA4Q9HCM2 1894 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CKAP5Q14008 2032 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 D6RAR5 112 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ADAM12O43184 909 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 IGHV2-70P01814 119 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 AHCYP23526 432 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 DAOAP59103 153 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 RPS14P62263 151 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 BOP1Q14137 746 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 TTLL9Q3SXZ7 439 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CTSL3PQ5NE16 218 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SLC25A25Q6KCM7 469 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 BHLHA9Q7RTU4 235 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 TECPR1Q7Z6L1 1165 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 PUSL1Q8N0Z8 303 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 TMEM86AQ8N2M4 240 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 FAM46DQ8NEK8 389 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OR6S1Q8NH40 331 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 PAPOLGQ9BWT3 736 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 TBC1D17Q9HA65 648 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 LATS2Q9NRM7 1088 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ACER3Q9NUN7 267 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 TMEM45AQ9NWC5 275 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 A0A1B0GV90 55 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 L7N2F9 121 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 GABRDO14764 452 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 FPGTO14772 594 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SCAMP1O15126 338 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 SUSD5O60279 629 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 OGNP20774 298 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 PTGFRP43088 359 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CAPZA1P52907 286 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CRISP1P54107 249 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 DEFB103AP81534 67 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 LSM11P83369 360 aaKnown RBP eCLIP8.28□□□□□ -1.08
VAPB-201ENST00000265619 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.28□□□□□ -1.08
VAPB-201ENST00000265619 SLC5A12Q1EHB4 618 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ACER2Q5QJU3 275 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 CYB5R2Q6BCY4 276 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 PSAPL1Q6NUJ1 521 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 FUT10Q6P4F1 479 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ZNF852Q6ZMS4 543 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 ESPNLQ6ZVH7 1005 aa8.28□□□□□ -1.08
VAPB-201ENST00000265619 MEX3DQ86XN8 651 aaKnown RBP8.28□□□□□ -1.08
VAPB-201ENST00000265619 SIAH3Q8IW03 269 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms