RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CNR2P34972 360 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 SLC16A1P53985 500 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 BTN1A1Q13410 526 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 ACOT4Q8N9L9 421 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 ST8SIA2Q92186 375 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 UBE2FQ969M7 185 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 PDXPQ96GD0 296 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 ZNF354BQ96LW1 612 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 SSR3Q9UNL2 185 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 PCDHGA12O60330 932 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 OSMP13725 252 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 PSMA1P25786 263 aaKnown RBP15.39■□□□□ 0.05
CTCF-201ENST00000264010 TNFRSF4P43489 277 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 MAZP56270 477 aaKnown RBP15.39■□□□□ 0.05
CTCF-201ENST00000264010 ZNF404Q494X3 552 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 AGBL4Q5VU57 503 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 ASPGQ86U10 573 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 GHDCQ8N2G8 530 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 OR2L5Q8NG80 312 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 OR6C4Q8NGE1 309 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 BTBD1Q9H0C5 482 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 NEUROG3Q9Y4Z2 214 aa15.39■□□□□ 0.05
CTCF-201ENST00000264010 AGR2O95994 175 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 HIST1H1TP22492 207 aaPredicted RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 PTGES3Q15185 160 aaKnown RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 PRRT3Q5FWE3 981 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 XAF1Q6GPH4 301 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 FRMPD2BQ6IN97 320 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 SFTPA1Q8IWL2 248 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 CAMKVQ8NCB2 501 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 GALNT11Q8NCW6 608 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 NUP43Q8NFH3 380 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 SH3YL1Q96HL8 342 aaPredicted RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 DOK1Q99704 481 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 MACROD1Q9BQ69 325 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 TEX101Q9BY14 249 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 GABARAPL3Q9BY60 117 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 SERHL2Q9H4I8 314 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 KLHL1Q9NR64 748 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 LIPT1Q9Y234 373 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 OTOL1A6NHN0 477 aaPredicted RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 APOC3P02656 99 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 EVI2BP34910 448 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 BSGP35613 385 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 RPE65Q16518 533 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 ZNF367Q7RTV3 350 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 DNASE1L2Q92874 299 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 CNPPD1Q9BV87 410 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 QPCTLQ9NXS2 382 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 DNAJC27Q9NZQ0 273 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 SCML1Q9UN30 329 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 ICKQ9UPZ9 632 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 PCDHGA6Q9Y5G7 932 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 PEX14O75381 377 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 CDK1P06493 297 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 AHRP35869 848 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 RPS15AP62244 130 aaKnown RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 SKP1P63208 163 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 SYT6Q5T7P8 510 aaPredicted RBP15.38■□□□□ 0.05
CTCF-201ENST00000264010 DHRS4L2Q6PKH6 230 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 TCEANCQ8N8B7 351 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 VMP1Q96GC9 406 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 ANKMY1Q9P2S6 941 aa15.38■□□□□ 0.05
CTCF-201ENST00000264010 NT5EP21589 574 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 XCR1P46094 333 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 GP2P55259 537 aaKnown RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 DBPQ10586 325 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 DNAJC22Q8N4W6 341 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 OR5D16Q8NGK9 328 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 NR4A3Q92570 626 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 PITX2Q99697 317 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 NIPSNAP1Q9BPW8 284 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 MED28Q9H204 178 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 TRIM64A6NGJ6 449 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TEX46H3BTG2 121 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 GABARAPO95166 117 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 EPHA2P29317 976 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 PKLRP30613 574 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 AVPR1BP47901 424 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 SMSP52788 366 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 SYPL1Q16563 259 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TSTQ16762 297 aaKnown RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 SAXO2Q658L1 398 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 IQCHQ86VS3 1027 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 RHOXF1Q8NHV9 184 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 GGHQ92820 318 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 ART5Q96L15 291 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 CHMP1AQ9HD42 196 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 CLDND1Q9NY35 253 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 OR6C2Q9NZP2 312 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 PSORS1C1Q9UIG5 152 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 PEX16Q9Y5Y5 336 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 DOCK6Q96HP0 2047 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 OR10H2O60403 315 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 CAMK1Q14012 370 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 TBCEQ15813 527 aaPredicted RBP15.37■□□□□ 0.05
CTCF-201ENST00000264010 ABHD13Q7L211 337 aa15.37■□□□□ 0.05
CTCF-201ENST00000264010 RASGRP3Q8IV61 690 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms