RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CPSF4LA6NMK7 179 aaKnown RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 H7BY64 318 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 GABRPO00591 440 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 EPPINO95925 133 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 ACADMP11310 421 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 SLC1A3P43003 542 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 AGFG1P52594 562 aaKnown RBP16.44■□□□□ 0.22
TRAM1-201ENST00000262213 SIGIRRQ6IA17 410 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 MORN4Q8NDC4 146 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 OR4M2Q8NGB6 313 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 HCAR2Q8TDS4 363 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 UBE2E3Q969T4 207 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 PRAP1Q96NZ9 151 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 ARHGAP9Q9BRR9 750 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 TDP1Q9NUW8 608 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 IL36AQ9UHA7 158 aa16.44■□□□□ 0.22
TRAM1-201ENST00000262213 NOS1APO75052 506 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ERAL1O75616 437 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SOD1P00441 154 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PPP2R1BP30154 601 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 BSGP35613 385 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 CLDN20P56880 219 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 TAS2R41P59536 307 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 COX10Q12887 443 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MAB21L1Q13394 359 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 RNASE12Q5GAN4 147 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 FAM83HQ6ZRV2 1179 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ADCK2Q7Z695 626 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 KLBQ86Z14 1044 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 BBS1Q8NFJ9 593 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 OR8H1Q8NGG4 311 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MACROD1Q9BQ69 325 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 NEUROD4Q9HD90 331 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 STMN3Q9NZ72 180 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MAT2BQ9NZL9 334 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 EXTL2Q9UBQ6 330 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 A0A087WUU8 490 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 GTPBP1O00178 669 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PROM1O43490 865 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PI15O43692 258 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PAHP00439 452 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 RB1P06400 928 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 IFNA8P32881 189 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 LASP1Q14847 261 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 LY6G5CQ5SRR4 150 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 FAM205BPQ63HN1 556 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PARS2Q7L3T8 475 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 FAM109AQ8N4B1 249 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 IL17RCQ8NAC3 791 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SLC43A3Q8NBI5 491 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SPRYD4Q8WW59 207 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF558Q96NG5 402 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 TBX5Q99593 518 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 RNF32Q9H0A6 362 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 NTNG1Q9Y2I2 539 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PCYT1BQ9Y5K3 369 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 TRAV6A0A075B6T7 132 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 CCL16O15467 120 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 CHRM4P08173 479 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 GNSP15586 552 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ELK1P19419 428 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MMP12P39900 470 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 GPR1P46091 355 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SREBF2Q12772 1141 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 TNK1Q13470 666 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF805Q5CZA5 627 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 C1orf94Q6P1W5 598 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 DPPA4Q7L190 304 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 RRM2BQ7LG56 351 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 C17orf64Q86WR6 236 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 NACC2Q96BF6 587 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 SLC38A2Q96QD8 506 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 NIPAL2Q9H841 368 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 FGF20Q9NP95 211 aaPredicted RBP16.43■□□□□ 0.22
TRAM1-201ENST00000262213 EQTNQ9NQ60 294 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 PCDHGB7Q9Y5F8 929 aa16.43■□□□□ 0.22
TRAM1-201ENST00000262213 MYO7AQ13402 2215 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 TGM5O43548 720 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 LANCL1O43813 399 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 UBXN7O94888 489 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 SLC2A10O95528 541 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 CCR2P41597 374 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 PCBP4P57723 403 aaKnown RBP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 MINDY4Q4G0A6 757 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 DUSP18Q8NEJ0 188 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 AKAP1Q92667 903 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 ZDHHC5Q9C0B5 715 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 MKRN2Q9H000 416 aaKnown RBP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 TRDV1A0A1B0GX56 115 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 FAM183AA6NL82 134 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 SNTNA6NMZ2 147 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 WASH3PC4AMC7 463 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 FAM157BP0CG42 384 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 C8orf89P0DMQ9 161 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms