RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ALPPP05187 535 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 PCGF2P35227 344 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 OR3A3P47888 321 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 WNT4P56705 351 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 FAPQ12884 760 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 DSG2Q14126 1118 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 BEX5Q5H9J7 111 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 ZNF761Q86XN6 746 aaPredicted RBP9.56□□□□□ -0.88
PALB2-201ENST00000261584 NATD1Q8N6N6 113 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 TESCQ96BS2 214 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 CNDP2Q96KP4 475 aaKnown RBP9.56□□□□□ -0.88
PALB2-201ENST00000261584 HHATLQ9HCP6 504 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 ANKRD31Q8N7Z5 1873 aa9.56□□□□□ -0.88
PALB2-201ENST00000261584 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 PI15O43692 258 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR7A10O76100 309 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR10A3P58181 314 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR12D2P58182 307 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SP3Q02447 781 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 CRYZQ08257 329 aaKnown RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 KANSL1Q7Z3B3 1105 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 METTL27Q8N6F8 245 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 ZMYND19Q96E35 227 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR4K3Q96R72 315 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 CCDC3Q9BQI4 270 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 CCDC32Q9BV29 185 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 TDP1Q9NUW8 608 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 PCDHGA2Q9Y5H1 932 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 PIKFYVEQ9Y2I7 2098 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 H3BQ06 376 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 HOXA2O43364 376 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 GPR37L1O60883 481 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 STX11O75558 287 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 IFNA16P05015 189 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 VIPR2P41587 438 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 MC3RP41968 323 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 LIM2P55344 173 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 CBLBQ13191 982 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 VEZF1Q14119 521 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 DEFB134Q4QY38 66 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 C2orf27AQ580R0 203 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SAXO2Q658L1 398 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 ALKAL2Q6UX46 152 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 LINC00471Q8N535 108 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 KCNN1Q92952 543 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 UBE2E3Q969T4 207 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SPATA9Q9BWV2 254 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SYNPO2LQ9H987 977 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 MARK1Q9P0L2 795 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 COL11A1P12107 1806 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 M0R233 179 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR10H2O60403 315 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SIX6O95475 246 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 ALDOBP05062 364 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 HBQ1P09105 142 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 ARSBP15848 533 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 JUNDP17535 347 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 DDCP20711 480 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 MMP11P24347 488 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 PTX3P26022 381 aaPredicted RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 ERP29P30040 261 aaKnown RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 PGDP52209 483 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 HSF2Q03933 536 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 SNTB2Q13425 540 aaKnown RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 SLC9A5Q14940 896 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 NDUFAF5Q5TEU4 345 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 PGBD2Q6P3X8 592 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 NUDT13Q86X67 352 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 FOXRED2Q8IWF2 684 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 KREMEN2Q8NCW0 462 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR4K13Q8NH42 304 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR4C6Q8NH72 309 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 DPH7Q9BTV6 452 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 BARHL1Q9BZE3 327 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 MKRN2Q9H000 416 aaKnown RBP9.55□□□□□ -0.88
PALB2-201ENST00000261584 OR10H1Q9Y4A9 318 aa9.55□□□□□ -0.88
PALB2-201ENST00000261584 TRAV27A0A087WT01 109 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
PALB2-201ENST00000261584 CENPBD1B2RD01 187 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TNFRSF10AO00220 468 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 ARPC5O15511 151 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3HP0C7X1 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 RPL3P39023 403 aaKnown RBP9.54□□□□□ -0.88
PALB2-201ENST00000261584 PNLIPRP1P54315 467 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 LTB4RQ15722 352 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 LIPIQ6XZB0 460 aa9.54□□□□□ -0.88
PALB2-201ENST00000261584 SLC36A4Q6YBV0 504 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms