RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 COQ5Q5HYK3 327 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 KIRREL2Q6UWL6 708 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 OR9A2Q8NGT5 310 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 MOGAT1Q96PD6 335 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ELF4Q99607 663 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 KLHL13Q9P2N7 655 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 AKAP10O43572 662 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 NUDT21O43809 227 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 NEURL1O76050 574 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ENO2P09104 434 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC5A2P31639 672 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 PLA2G5P39877 138 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 DCTP40126 519 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 HPCAP84074 193 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 RPA4Q13156 261 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 LDLRAP1Q5SW96 308 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 PIWIL3Q7Z3Z3 882 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ZCCHC7Q8N3Z6 543 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SLC5A11Q8WWX8 675 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 RMND5AQ9H871 391 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SPTA1P02549 2419 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 LIN7AO14910 233 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 PIP5K1CO60331 668 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ITGAMP11215 1152 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ATP6V0D1P61421 351 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CHRNEQ04844 493 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 EXOSC7Q15024 291 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SSX1Q16384 188 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ACSM5Q6NUN0 579 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ERAP2Q6P179 960 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 C16orf89Q6UX73 402 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 KIAA1324Q6UXG2 1013 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 TRMT11Q7Z4G4 463 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 AMZ2Q86W34 360 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 DTWD2Q8NBA8 298 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 MCOLN3Q8TDD5 553 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ADGRG7Q96K78 797 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 OSBPL10Q9BXB5 764 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 KLHL4Q9C0H6 718 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CXorf21Q9HAI6 301 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 GID8Q9NWU2 228 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 LRIT1Q9P2V4 623 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 SUCOQ9UBS9 1254 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CORINQ9Y5Q5 1042 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 C6orf47O95873 294 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 FAM157BP0CG42 384 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 COX6A1P12074 109 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 POLR2CP19387 275 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 GRK2P25098 689 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CSTF2P33240 577 aaKnown RBP eCLIP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 RAB8AP61006 207 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 RACK1P63244 317 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CYP4F2P78329 520 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 FOLH1Q04609 750 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 TRIM25Q14258 630 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 DNAL1Q4LDG9 190 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CBLL1Q75N03 491 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 LONP2Q86WA8 852 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 MFSD9Q8NBP5 474 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 CHDHQ8NE62 594 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 OR10A6Q8NH74 314 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ELP5Q8TE02 316 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 ACTR10Q9NZ32 417 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 PKP3Q9Y446 797 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 NAV3Q8IVL0 2385 aa5.17□□□□□ -1.58
TOPBP1-201ENST00000260810 OR6C74A6NCV1 312 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SHISA8B8ZZ34 492 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 H0Y3Z8 333 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CD38P28907 300 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ALDH3B2P48448 385 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SIM1P81133 766 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ARHGAP19Q14CB8 494 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CES5AQ6NT32 575 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ZCCHC8Q6NZY4 707 aaKnown RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 USP53Q70EK8 1073 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PPP1R32Q7Z5V6 425 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 GGNQ86UU5 652 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 IQCHQ86VS3 1027 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 BBS1Q8NFJ9 593 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 OR8D1Q8WZ84 308 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF350Q9GZX5 532 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MMADHCQ9H3L0 296 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 MTORP42345 2549 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 NAV2Q8IVL1 2488 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 C5orf58C9J3I9 102 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 DSCR3O14972 297 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 C1QL1O75973 258 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 GPANK1O95872 356 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 GASTP01350 101 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 OPN1SWP03999 348 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 DDCP20711 480 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CDH15P55291 814 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ID2Q02363 134 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 CD300CQ08708 224 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 SP140Q13342 867 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 FAM83EQ2M2I3 478 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 ZNF791Q3KP31 576 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 THEMIS2Q5TEJ8 643 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 PRMT9Q6P2P2 845 aa5.16□□□□□ -1.58
TOPBP1-201ENST00000260810 WDR74Q6RFH5 385 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms