RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ZNF12P17014 697 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 MMP11P24347 488 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 MPIP34949 423 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 FZD5Q13467 585 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 MED22Q15528 200 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 PUS10Q3MIT2 529 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 C6orf132Q5T0Z8 1188 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SLX4IPQ5VYV7 408 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 BHLHB9Q6PI77 547 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 ASPGQ86U10 573 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 VRK2Q86Y07 508 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 OR4N5Q8IXE1 308 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SRFBP1Q8NEF9 429 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 TSTD1Q8NFU3 115 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 OR4K5Q8NGD3 323 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 DOK4Q8TEW6 326 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 COL26A1Q96A83 441 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 DNAAF2Q9NVR5 837 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC9A8Q9Y2E8 581 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 MRPS17Q9Y2R5 130 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SCN3AQ9NY46 2000 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 EMC8O43402 210 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 OCM2P0CE71 109 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 OCMP0CE72 109 aaPredicted RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 NR2F6P10588 404 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 POLR2CP19387 275 aaPredicted RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SERPINB10P48595 397 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 RGS6P49758 472 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 OLR1P78380 273 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 PRR5P85299 388 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 IFITM3Q01628 133 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 INAQ16352 499 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 RGS21Q2M5E4 152 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 DEFB134Q4QY38 66 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 PERM1Q5SV97 790 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 FAM111BQ6SJ93 734 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SIX5Q8N196 739 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 CLIP4Q8N3C7 705 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 WDR36Q8NI36 951 aaKnown RBP17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 RLN3Q8WXF3 142 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 COX4I2Q96KJ9 171 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 CENPOQ9BU64 300 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC38A1Q9H2H9 487 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 ZNF780BQ9Y6R6 833 aa17.55■□□□□ 0.4
PDLIM4-201ENST00000253754 SH3D21A4FU49 640 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 EFCAB10A6NFE3 127 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 KDM1AO60341 852 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 MPZL2O60487 215 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 ZIC2O95409 532 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC15A1P46059 708 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 HOXC5Q00444 222 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 C12orf73Q69YU5 71 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 NRROSQ86YC3 692 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 TMEFF1Q8IYR6 380 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 TCEANCQ8N8B7 351 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CHPT1Q8WUD6 406 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GAL3ST3Q96A11 431 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 C10orf90Q96M02 699 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC6A18Q96N87 628 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 OR2A14Q96R47 310 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CHCHD6Q9BRQ6 235 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CDCA4Q9BXL8 241 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 TPSD1Q9BZJ3 242 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 SLC25A19Q9HC21 320 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 FBXO8Q9NRD0 319 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GIMAP4Q9NUV9 329 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 IFT52Q9Y366 437 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 TTC28Q96AY4 2481 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GSAPA4D1B5 854 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 A6NCN8 305 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 DBTP11182 482 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 AKT2P31751 481 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 RPS15AP62244 130 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 SIM1P81133 766 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GPR18Q14330 331 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 ALG11Q2TAA5 492 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 PLAG1Q6DJT9 500 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 FAM160A2Q8N612 972 aaPredicted RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 MORN4Q8NDC4 146 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 OR7G2Q8NG99 324 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GIMAP5Q96F15 307 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 GPR174Q9BXC1 333 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 WDR12Q9GZL7 423 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 TVP23BQ9NYZ1 205 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CNOT2Q9NZN8 540 aaKnown RBP17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 WNT16Q9UBV4 365 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CLEC2DQ9UHP7 191 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 B3GNT3Q9Y2A9 372 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 CHST2Q9Y4C5 530 aa17.54■□□□□ 0.4
PDLIM4-201ENST00000253754 NCOR1O75376 2440 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 A0A0G2JPF8 293 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 ZNF860A6NHJ4 632 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 HNRNPCL2B2RXH8 293 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 HNRNPCL3B7ZW38 293 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 FCMRO60667 390 aa17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 CNOT3O75175 753 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 RPLP0P05388 317 aaKnown RBP17.53■□□□□ 0.4
PDLIM4-201ENST00000253754 IGHV4-34P06331 123 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms