RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RNF148Q8N7C7 305 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 OR1N1Q8NGS0 311 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 NCLNQ969V3 563 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 DUS3LQ96G46 650 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 LRGUKQ96M69 825 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 VSTM2LQ96N03 204 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 IP6K3Q96PC2 410 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 TRNT1Q96Q11 434 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 SEMA4CQ9C0C4 833 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 OR10A5Q9H207 317 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 OR51I1Q9H343 314 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 SOX17Q9H6I2 414 aaPredicted RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 AKIRIN1Q9H9L7 192 aaPredicted RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 BCL2L10Q9HD36 194 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ASCL3Q9NQ33 180 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 PNO1Q9NRX1 252 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 OLAHQ9NV23 265 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 COPS7AQ9UBW8 275 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 TCFL5Q9UL49 500 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 ANGPT4Q9Y264 503 aa12.05□□□□□ -0.48
LSM8-201ENST00000249299 PTRH2Q9Y3E5 179 aaKnown RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 HEMK1Q9Y5R4 338 aaPredicted RBP12.05□□□□□ -0.48
LSM8-201ENST00000249299 ARPC2O15144 300 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 FKBP6O75344 327 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 DDAH2O95865 285 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 UMODP07911 640 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ALOX5P09917 674 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ICAM2P13598 275 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ETS2P15036 469 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 TCN1P20061 433 aaPredicted RBP12.04□□□□□ -0.48
LSM8-201ENST00000249299 TCN2P20062 427 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 LCN1P31025 176 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 GPR143P51810 404 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 EFNA3P52797 238 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 CRISP3P54108 245 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 SLC37A1P57057 533 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 AP2B1P63010 937 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ELF3P78545 371 aaPredicted RBP12.04□□□□□ -0.48
LSM8-201ENST00000249299 CDK6Q00534 326 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 RHDQ02161 417 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 EXT1Q16394 746 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 CRB2Q5IJ48 1285 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 AAGABQ6PD74 315 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 DGAT2L6Q6ZPD8 337 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 SZRD1Q7Z422 152 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 PRSS58Q8IYP2 241 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 CLEC4FQ8N1N0 589 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ENDOVQ8N8Q3 282 aaKnown RBP12.04□□□□□ -0.48
LSM8-201ENST00000249299 CHDHQ8NE62 594 aaPredicted RBP12.04□□□□□ -0.48
LSM8-201ENST00000249299 B3GNT7Q8NFL0 401 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 OR52R1Q8NGF1 315 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 PNPT1Q8TCS8 783 aaKnown RBP12.04□□□□□ -0.48
LSM8-201ENST00000249299 SLC2A12Q8TD20 617 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ZNF721Q8TF20 911 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 CT55Q8WUE5 264 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 BTBD9Q96Q07 612 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 SPATA5L1Q9BVQ7 753 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 BTBD2Q9BX70 525 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 TRIM8Q9BZR9 551 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 ERVK-19Q9WJR5 959 aa12.04□□□□□ -0.48
LSM8-201ENST00000249299 A0A0G2JPF8 293 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 TCRBV3S1A0A5B6 114 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 OR2W5A6NFC9 320 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 HNRNPCL2B2RXH8 293 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 HNRNPCL3B7ZW38 293 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 CXCR6O00574 342 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 CREG1O75629 220 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 GPIP06744 558 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 C8BP07358 591 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 HNRNPCL4P0DMR1 293 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 DRD5P21918 477 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 KDELR2P33947 212 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 PPICP45877 212 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 CLCN2P51788 898 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 PGDP52209 483 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 PCBP3P57721 371 aaKnown RBP12.03□□□□□ -0.48
LSM8-201ENST00000249299 DNASE1L3Q13609 305 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 SCARB2Q14108 478 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 PUM1Q14671 1186 aaKnown RBP eCLIP12.03□□□□□ -0.481e-9■■□□□ 12
LSM8-201ENST00000249299 CYP27C1Q4G0S4 372 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 SFT2D3Q587I9 215 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 TNFAIP8L2Q6P589 184 aaPredicted RBP12.03□□□□□ -0.48
LSM8-201ENST00000249299 FAM199XQ6PEV8 388 aaPredicted RBP12.03□□□□□ -0.48
LSM8-201ENST00000249299 RNF111Q6ZNA4 994 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 LRRC74BQ6ZQY2 392 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 C10orf111Q8N326 155 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 FAM156AQ8NDB6 213 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 NFAM1Q8NET5 270 aaPredicted RBP12.03□□□□□ -0.48
LSM8-201ENST00000249299 C16orf52Q8NHV5 167 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 BBS10Q8TAM1 723 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 NUBPLQ8TB37 319 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 SLC38A5Q8WUX1 472 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 WDR60Q8WVS4 1066 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 XAGE5Q8WWM1 108 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 RASSF5Q8WWW0 418 aa12.03□□□□□ -0.48
LSM8-201ENST00000249299 TP53INP1Q96A56 240 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms