RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 SLC6A14Q9UN76 642 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 H0YIV9 168 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 PLPP1O14494 284 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 ORC5O43913 435 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 CTSLP07711 333 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 S100A1P23297 94 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 GIPRP48546 466 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 EXOSC7Q15024 291 aaKnown RBP12.95□□□□□ -0.34
NCLN-201ENST00000246117 KIAA0040Q15053 153 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 TOMM20Q15388 145 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 GFOD2Q3B7J2 385 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 FAM220AQ7Z4H9 259 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 CEACAM19Q7Z692 300 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 BEST4Q8NFU0 473 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 OR4K14Q8NGD5 310 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 SLC7A13Q8TCU3 470 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 FATE1Q969F0 183 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 TRIM63Q969Q1 353 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 HRASLS5Q96KN8 279 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 CAMK1GQ96NX5 476 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 WSB2Q9NYS7 404 aaPredicted RBP12.95□□□□□ -0.34
NCLN-201ENST00000246117 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 HCN3Q9P1Z3 774 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 EIF3KQ9UBQ5 218 aaKnown RBP12.95□□□□□ -0.34
NCLN-201ENST00000246117 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
NCLN-201ENST00000246117 FGF19O95750 216 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ADAP00813 363 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 SRPRAP08240 638 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 BMPR1AP36894 532 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 KCNJ10P78508 379 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ERV3-1Q14264 604 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 SERPINA12Q8IW75 414 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 CPXM2Q8N436 756 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 CHFRQ96EP1 664 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ERMAPQ96PL5 475 aaPredicted RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 SAP130Q9H0E3 1048 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 DDX31Q9H8H2 851 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 TMEM184CQ9NVA4 438 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 CLDND1Q9NY35 253 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 LTBP1Q14766 1721 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ASXL3Q9C0F0 2248 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 TFPIP10646 304 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ITGB8P26012 769 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ACVR2AP27037 513 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 APEX1P27695 318 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 BMP8BP34820 402 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 DSG2Q14126 1118 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 GXYLT1Q4G148 440 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 TMPRSS9Q7Z410 1059 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 BMP8AQ7Z5Y6 402 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 WDR20Q8TBZ3 569 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 THAP3Q8WTV1 239 aaPredicted RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 DUS3LQ96G46 650 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 DUXAA6NLW8 204 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 SLC25A12O75746 678 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 EDNRAP25101 427 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 CDK3Q00526 305 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 CRYZQ08257 329 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.345e-7■■■■■ 27.3
NCLN-201ENST00000246117 CCDC80Q76M96 950 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ADIPOR2Q86V24 386 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 OR8D2Q9GZM6 311 aa12.94□□□□□ -0.34
NCLN-201ENST00000246117 ELL3Q9HB65 397 aaPredicted RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 SRA1Q9HD15 236 aaKnown RBP12.94□□□□□ -0.34
NCLN-201ENST00000246117 HTR3EA5X5Y0 456 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 INMT-MINDY4F8WBC2 141 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 HPGDSO60760 199 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ADAM23O75077 832 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 MMP12P39900 470 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 OMPP47874 163 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 SLC6A12P48065 614 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 RAB15P59190 212 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 LRIF1Q5T3J3 769 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 METTL2BQ6P1Q9 378 aaKnown RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 UCN3Q969E3 161 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ZMYND19Q96E35 227 aaPredicted RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 KCNN2Q9H2S1 579 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 KLHL31Q9H511 634 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 CALML5Q9NZT1 146 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 MARK1Q9P0L2 795 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ANKMY1Q9P2S6 941 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 ATXN7L1Q9ULK2 861 aaPredicted RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 PPIEQ9UNP9 301 aaKnown RBP12.93□□□□□ -0.34
NCLN-201ENST00000246117 ATG4BQ9Y4P1 393 aa12.93□□□□□ -0.34
NCLN-201ENST00000246117 HSPE1-MOB4S4R3N1 261 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms