RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 DUSP5Q16690 384 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 AP1ARQ63HQ0 302 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 QSOX2Q6ZRP7 698 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 OTUB1Q96FW1 271 aaPredicted RBP22.2■■□□□ 1.14
RRP9-201ENST00000232888 AMBRA1Q9C0C7 1298 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 POLE3Q9NRF9 147 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 DHCR7Q9UBM7 475 aaKnown RBP22.2■■□□□ 1.14
RRP9-201ENST00000232888 C3orf18Q9UK00 162 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 SLC9A8Q9Y2E8 581 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 ORC6Q9Y5N6 252 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 U3KQV3 271 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 UNC13CQ8NB66 2214 aa22.2■■□□□ 1.14
RRP9-201ENST00000232888 BDP1A6H8Y1 2624 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 RP1P56715 2156 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 MYOCOSA0A1B0GUC4 107 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 PRAMEF25A6NGN4 478 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 CDC123O75794 336 aaPredicted RBP22.19■■□□□ 1.14
RRP9-201ENST00000232888 DIRAS1O95057 198 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 ALBP02768 609 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 ALPPP05187 535 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 OR1D4P47884 311 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 CHN2P52757 468 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 HMGA2P52926 109 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 RAD23AP54725 363 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 ERV3-1Q14264 604 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 PUM1Q14671 1186 aaKnown RBP eCLIP22.19■■□□□ 1.14
RRP9-201ENST00000232888 CYP4Z1Q86W10 505 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 CDS1Q92903 461 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 CNBD2Q96M20 576 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 CACYBPQ9HB71 228 aaKnown RBP22.19■■□□□ 1.14
RRP9-201ENST00000232888 MKKSQ9NPJ1 570 aaPredicted RBP22.19■■□□□ 1.14
RRP9-201ENST00000232888 RARRES3Q9UL19 164 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 IFT52Q9Y366 437 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 MAGED1Q9Y5V3 778 aaPredicted RBP22.19■■□□□ 1.14
RRP9-201ENST00000232888 ASXL3Q9C0F0 2248 aa22.19■■□□□ 1.14
RRP9-201ENST00000232888 FLRT2O43155 660 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 LDOC1O95751 146 aaPredicted RBP22.18■■□□□ 1.14
RRP9-201ENST00000232888 RECKO95980 971 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 HBQ1P09105 142 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 RRM2P31350 389 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 COL9A2Q14055 689 aaPredicted RBP22.18■■□□□ 1.14
RRP9-201ENST00000232888 ZNHIT3Q15649 155 aaPredicted RBP22.18■■□□□ 1.14
RRP9-201ENST00000232888 DHRS4L2Q6PKH6 230 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 UGT2A3Q6UWM9 527 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 DGAT2L6Q6ZPD8 337 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 SLITRK4Q8IW52 837 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 OR52R1Q8NGF1 315 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 LMF2Q9BU23 707 aaKnown RBP22.18■■□□□ 1.14
RRP9-201ENST00000232888 YIPF2Q9BWQ6 316 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 SYNDIG1Q9H7V2 258 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 BATF3Q9NR55 127 aa22.18■■□□□ 1.14
RRP9-201ENST00000232888 TNFRSF11BO00300 401 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 PRAMEF2O60811 474 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 NKX2-2O95096 273 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SNAP29O95721 258 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 LYNP07948 512 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 PABPC4LP0CB38 370 aaKnown RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 TNFRSF1BP20333 461 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 MAOAP21397 527 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 MYF6P23409 242 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 PRKAR1BP31321 381 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 ADARB1P78563 741 aaKnown RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 CHRNEQ04844 493 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 FUT7Q11130 342 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 EXOSC7Q15024 291 aaKnown RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 MLIPQ5VWP3 458 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 TTC23Q5W5X9 447 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 LAIR1Q6GTX8 287 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 ZNF605Q86T29 641 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SIMC1Q8NDZ2 872 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 OR7G1Q8NGA0 311 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 CNDP2Q96KP4 475 aaKnown RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 PTCHD1Q96NR3 888 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SDF2Q99470 211 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SAP130Q9H0E3 1048 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SMURF2Q9HAU4 748 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 SIDT1Q9NXL6 827 aaKnown RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 PDP1Q9P0J1 537 aaPredicted RBP22.17■■□□□ 1.14
RRP9-201ENST00000232888 KCND3Q9UK17 655 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 LYVE1Q9Y5Y7 322 aa22.17■■□□□ 1.14
RRP9-201ENST00000232888 D6RAR5 112 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 LGI1O95970 557 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 ACP1P24666 158 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 SMIM11AP58511 58 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 ARHGAP40Q5TG30 622 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 FRRS1Q6ZNA5 592 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 HS3ST5Q8IZT8 346 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 COX18Q8N8Q8 333 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 NR4A3Q92570 626 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 OR6C1Q96RD1 312 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 SLC7A5P2Q9GIP4 190 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 ZNF350Q9GZX5 532 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 NECTIN3Q9NQS3 549 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 UBAP1Q9NZ09 502 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 ZNF232Q9UNY5 417 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 WDR45Q9Y484 360 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 HEMK1Q9Y5R4 338 aaPredicted RBP22.16■■□□□ 1.14
RRP9-201ENST00000232888 IGKV3D-11A0A0A0MRZ8 115 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 DYRK3O43781 588 aa22.16■■□□□ 1.14
RRP9-201ENST00000232888 HS6ST1O60243 411 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms