RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC25A36Q96CQ1 311 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 NUS1Q96E22 293 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 CLMPQ9H6B4 373 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 COPS3Q9UNS2 423 aa13.13□□□□□ -0.31
HCFC2-201ENST00000229330 COL2A1P02458 1487 aaPredicted RBP13.13□□□□□ -0.31
HCFC2-201ENST00000229330 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 POLR1CO15160 346 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 CACNG3O60359 315 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 DLSTP36957 453 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 GP2P55259 537 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 TLE2Q04725 743 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ARL14Q8N4G2 192 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 CD200R1Q8TD46 325 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 SPRYD4Q8WW59 207 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 GIMAP1Q8WWP7 306 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 SLC39A13Q96H72 371 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ALG8Q9BVK2 526 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 BLOC1S5-TXNDC5H3BN57 136 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ACPPP15309 386 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 DDCP20711 480 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 CBFBQ13951 182 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 FCN2Q15485 313 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 PCGF3Q3KNV8 242 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 VASH1Q7L8A9 365 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 CLDN22Q8N7P3 220 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ELP4Q96EB1 424 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 TMEM41AQ96HV5 264 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ATOH8Q96SQ7 321 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 C16orf70Q9BSU1 422 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 HOXD1Q9GZZ0 328 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 GALNT9Q9HCQ5 603 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 SSX5O60225 188 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 C1QBP02746 253 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 C8AP07357 584 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 SDC1P18827 310 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 KCTD20Q7Z5Y7 419 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 PDZD3Q86UT5 571 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 OR5W2Q8NH69 310 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 DUS3LQ96G46 650 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF419Q96HQ0 510 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ARL5BQ96KC2 179 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 RPS10P5Q9NQ39 176 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 GLOD5A6NK44 160 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ACRP10323 421 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 HRH2P25021 359 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 RBMS1P29558 406 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 DGLUCYQ7Z3D6 616 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 FUNDC1Q8IVP5 155 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ENTHD1Q8IYW4 607 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 GRHPRQ9UBQ7 328 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 LIPT1Q9Y234 373 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 RASD1Q9Y272 281 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 A6NIN4 97 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 POP7O75817 140 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 STATHP02808 62 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 AMY2AP04746 511 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 SCG5P05408 212 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 KDELC1Q6UW63 502 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 OR6N2Q8NGY6 317 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 CNN2Q99439 309 aaKnown RBP13.12□□□□□ -0.31
HCFC2-201ENST00000229330 WDR26Q9H7D7 661 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 EMC7Q9NPA0 242 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ANKRD12Q6UB98 2062 aa13.12□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF35P13682 527 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 CXCR1P25024 350 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 GAS6Q14393 721 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
HCFC2-201ENST00000229330 NOX3Q9HBY0 568 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 HSFX1Q9UBD0 423 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 NAALAD2Q9Y3Q0 740 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 HMX2A2RU54 273 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 PFKMP08237 780 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 AQP2P41181 271 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 ZNF33BQ06732 778 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 ACBD4Q8NC06 268 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 OR1J4Q8NGS1 313 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 OR56B4Q8NH76 319 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 ZFAND1Q8TCF1 268 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 SLCO4A1Q96BD0 722 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 HRASLS5Q96KN8 279 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
HCFC2-201ENST00000229330 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 LDB2O43679 373 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 UBBP0CG47 229 aa13.11□□□□□ -0.31
HCFC2-201ENST00000229330 UBCP0CG48 685 aaKnown RBP13.11□□□□□ -0.31
HCFC2-201ENST00000229330 APEX1P27695 318 aaKnown RBP13.11□□□□□ -0.31
HCFC2-201ENST00000229330 RPS27AP62979 156 aaKnown RBP13.11□□□□□ -0.31
HCFC2-201ENST00000229330 UBA52P62987 128 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms