RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 AP2A2O94973 939 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 UROSP10746 265 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PTGFRP43088 359 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 HSPA7P48741 367 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 SNRPEP62304 92 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 BCL2L1Q07817 233 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR2T5Q6IEZ7 315 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 SCIMPQ6UWF3 145 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ZNF605Q86T29 641 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CLDN22Q8N7P3 220 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR10Q1Q8NGQ4 319 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR2T29Q8NH02 315 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ZDHHC1Q8WTX9 485 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 DDX31Q9H8H2 851 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 HHATLQ9HCP6 504 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 RAD18Q9NS91 495 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ING1Q9UK53 422 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PCDHB1Q9Y5F3 818 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ABHD14A-ACY1A0A1B0GW23 586 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 TGM5O43548 720 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CLDN7O95471 211 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ENGP17813 658 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 FPR1P21462 350 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ITGB7P26010 798 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CD70P32970 193 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CTNNB1P35222 781 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CRYBB2P43320 205 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ACTR1AP61163 376 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CDKN3Q16667 212 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 C18orf21Q32NC0 220 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 DGKKQ5KSL6 1271 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CERS6Q6ZMG9 384 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 Q6ZPB1 254 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 TPGS1Q6ZTW0 290 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 GPR149Q86SP6 731 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ZFAND4Q86XD8 727 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR52B6Q8NGF0 335 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR2T35Q8NGX2 323 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 OR2T11Q8NH01 316 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PYURFQ96I23 114 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CDK15Q96Q40 435 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 THUMPD3Q9BV44 507 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 BRINP2Q9C0B6 783 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 ZCCHC2Q9C0B9 1178 aaKnown RBP12.89□□□□□ -0.35
GABPB1-201ENST00000220429 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PRSS21Q9Y6M0 314 aa12.89□□□□□ -0.35
GABPB1-201ENST00000220429 PLXNB3Q9ULL4 1909 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 E9PQ18 207 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 KPNA3O00505 521 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 GJA1P17302 382 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CASP6P55212 293 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 PWP1Q13610 501 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 IL18Q14116 193 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 DOC2BQ14184 412 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CNIH2Q6PI25 160 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SLC9B2Q86UD5 537 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 WDSUB1Q8N9V3 476 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 MRPS31Q92665 395 aaKnown RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SOSTQ9BQB4 213 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CCM2Q9BSQ5 444 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CDCA4Q9BXL8 241 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 ASB8Q9H765 288 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 IL26Q9NPH9 171 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 NUDT4Q9NZJ9 180 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 GPR171O14626 319 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SDC3O75056 442 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 LY86O95711 162 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 IL1AP01583 271 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SCG5P05408 212 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SYPP08247 313 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 ERVPABLB-1P60509 514 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 SLC7A9P82251 487 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 NFATC2Q13469 925 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 UGT8Q16880 541 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 TMEM44Q2T9K0 475 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 PLA1AQ53H76 456 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 PTRHD1Q6GMV3 140 aaKnown RBP12.88□□□□□ -0.35
GABPB1-201ENST00000220429 WASH2PQ6VEQ5 465 aa12.88□□□□□ -0.35
GABPB1-201ENST00000220429 CPXM2Q8N436 756 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms