RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 FRMD6Q96NE9 622 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 QRSL1Q9H0R6 528 aaKnown RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 ANKRA2Q9H9E1 313 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 FGF20Q9NP95 211 aaPredicted RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 COMMD3Q9UBI1 195 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 NDRG2Q9UN36 371 aaKnown RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 LRRK1Q38SD2 2015 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 REV3LO60673 3130 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 A0A0B4J293 547 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 TMEM129A0AVI4 362 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 OTOL1A6NHN0 477 aaPredicted RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 SEC14L5O43304 696 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 GSTM3P21266 225 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 SLC6A11P48066 632 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 MLLT1Q03111 559 aaPredicted RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 FUT5Q11128 374 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 MLC1Q15049 377 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 FNDC3BQ53EP0 1204 aaKnown RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 GPAT3Q53EU6 434 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ZNF628Q5EBL2 1059 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 OR4C11Q6IEV9 310 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ZNF730Q6ZMV8 503 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 PRICKLE2Q7Z3G6 844 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ADCK2Q7Z695 626 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ATP6V1C2Q8NEY4 427 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 BBS10Q8TAM1 723 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 TEX47Q8TBZ9 253 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 RNF31Q96EP0 1072 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 RNF170Q96K19 258 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 C17orf62Q9BQA9 187 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 RNF121Q9H920 327 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 A0A087WUU8 490 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 A0A1W2PPV9 198 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 PRRT4C9JH25 899 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 SLC9A3R1O14745 358 aaPredicted RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 NTN1O95631 604 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ALPPP05187 535 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 APEX1P27695 318 aaKnown RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 SSR2P43308 183 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 MTNR1AP48039 350 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 KHKP50053 298 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 VASPP50552 380 aaPredicted RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 LBX1P52954 281 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ARHGAP19Q14CB8 494 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.25■□□□□ 0.19
USB1-201ENST00000219281 C9orf64Q5T6V5 341 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 FAM46CQ5VWP2 391 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 FAM109BQ6ICB4 259 aaPredicted RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 NOXA1Q86UR1 476 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 OR8D4Q8NGM9 314 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ENKURQ8TC29 256 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 ZFYVE19Q96K21 471 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 GDF15Q99988 308 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 DDX31Q9H8H2 851 aaKnown RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 SLC35C2Q9NQQ7 365 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 MRPS18AQ9NVS2 196 aaKnown RBP16.25■□□□□ 0.19
USB1-201ENST00000219281 GSTK1Q9Y2Q3 226 aa16.25■□□□□ 0.19
USB1-201ENST00000219281 RFXAPO00287 272 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 GUCY1B2O75343 617 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 ADH5P11766 374 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 SOX18P35713 384 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 MAN2A2P49641 1150 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 CD83Q01151 205 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 DMPKQ09013 629 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 RPA4Q13156 261 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 ZNF750Q32MQ0 723 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 CLEC12AQ5QGZ9 265 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 SLC27A4Q6P1M0 643 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 LHFPL3Q86UP9 236 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 TMIEQ8NEW7 156 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 ANKK1Q8NFD2 765 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 OR8D1Q8WZ84 308 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 AP3S1Q92572 193 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 BBS4Q96RK4 519 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 MENTQ9BUN1 341 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 TAS2R7Q9NYW3 318 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 CNIH4Q9P003 139 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 MALT1Q9UDY8 824 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 KCNE3Q9Y6H6 103 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 TRANK1O15050 2925 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 COL4A3Q01955 1670 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 A0A0A6YYD5 115 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 IRGMA1A4Y4 181 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 SNTNA6NMZ2 147 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 CENPBD1B2RD01 187 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 CASKO14936 926 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 FRS3O43559 492 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 SCO2O43819 266 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 ERAL1O75616 437 aaKnown RBP16.24■□□□□ 0.19
USB1-201ENST00000219281 LIMS3P0CW19 117 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 LIMS4P0CW20 117 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 GABRA5P31644 462 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 LASP1Q14847 261 aaKnown RBP16.24■□□□□ 0.19
USB1-201ENST00000219281 MINDY4Q4G0A6 757 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 LCN1P1Q5VSP4 162 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 ZNF793Q6ZN11 406 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 NANOGNBQ7Z5D8 188 aa16.24■□□□□ 0.19
USB1-201ENST00000219281 SIMC1Q8NDZ2 872 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms