RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 C1QTNF7Q9BXJ2 289 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 IMPAD1Q9NX62 359 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 GPR83Q9NYM4 423 aa9.39□□□□□ -0.91
USP11-201ENST00000218348 LOC105369274A0A096LPK9 316 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 LOC102723532A0A0G2JNH3 316 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 HMGN4O00479 90 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 UGT2B11O75310 529 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SULT1C4O75897 302 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 MFN2O95140 757 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 GASTP01350 101 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ARAFP10398 606 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 APEHP13798 732 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 TNNI3P19429 210 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 PKLRP30613 574 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 CTSKP43235 329 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 GP2P55259 537 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 NUP107P57740 925 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 BPIFB3P59826 476 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ARHGAP19Q14CB8 494 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 RBM48Q5RL73 367 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 ARMC8Q8IUR7 673 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ENTHD1Q8IYW4 607 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 OR4N4Q8N0Y3 316 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SLC15A4Q8N697 577 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 IQCF1Q8N6M8 205 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 GPR32P1Q8NGA4 272 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 OR52E4Q8NGH9 312 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SLC9A6Q92581 669 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 RORBQ92753 470 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SLC35G5Q96KT7 338 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 TREX2Q9BQ50 279 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 EPS8L2Q9H6S3 715 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ZNF556Q9HAH1 456 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 PELI2Q9HAT8 420 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SEMA3GQ9NS98 782 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SCN3BQ9NY72 215 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 RNF6Q9Y252 685 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ALPK2Q86TB3 2170 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 A0A1W2PQ72 361 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 CLDN24A6NM45 220 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 POLR1CO15160 346 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 SEMA7AO75326 666 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 CTSBP07858 339 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 IFI30P13284 250 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 CCNA2P20248 432 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 HIST1H1TP22492 207 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 RPL3P39023 403 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 EPS8Q12929 822 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 SOWAHCQ53LP3 525 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 OR5P2Q8WZ92 322 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 AMDHD1Q96NU7 426 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 GPR174Q9BXC1 333 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 IFT22Q9H7X7 185 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 POLE4Q9NR33 117 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 IL20RAQ9UHF4 553 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 PCDHGA6Q9Y5G7 932 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 LRP4O75096 1905 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 FFAR1O14842 300 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ADAMDEC1O15204 470 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 LDB3O75112 727 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 DNAJB5O75953 348 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SEMG1P04279 462 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ATP5A1P25705 553 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 CMPK1P30085 196 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 HNRNPFP52597 415 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 BLVRAP53004 296 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 NCS1P62166 190 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 AQP6Q13520 282 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 GPR18Q14330 331 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 SEC23BQ15437 767 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ZNF630Q2M218 657 aaPredicted RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 FRMPD2BQ6IN97 320 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 BTLAQ7Z6A9 289 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 CCDC103Q8IW40 242 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 OR5T3Q8NGG3 340 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 OR13F1Q8NGS4 319 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 EDAQ92838 391 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 WACQ9BTA9 647 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 PCBD2Q9H0N5 130 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 ACER3Q9NUN7 267 aa9.38□□□□□ -0.91
USP11-201ENST00000218348 MRPS2Q9Y399 296 aaKnown RBP9.38□□□□□ -0.91
USP11-201ENST00000218348 PNMA8CA0A1B0GUJ8 204 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 SLC16A6O15403 523 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 CTSVO60911 334 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 WBP4O75554 376 aaKnown RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 CDC123O75794 336 aaPredicted RBP9.37□□□□□ -0.91
USP11-201ENST00000218348 BCL10O95999 233 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 STSP08842 583 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 DRD1P21728 446 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 NTSP30990 170 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 CRISP3P54108 245 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 MLLT10P55197 1068 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 HYAL2Q12891 473 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 AGERQ15109 404 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 RFX4Q33E94 735 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 CCNJQ5T5M9 372 aa9.37□□□□□ -0.91
USP11-201ENST00000218348 KIAA1161Q6NSJ0 714 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms