RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 WIPF3A6NGB9 483 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 OR6C70A6NIJ9 312 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 TRPC5OSA6NMA1 111 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 HDAC3O15379 428 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 ERN1O75460 977 aaKnown RBP16.01■□□□□ 0.15
MRPL28-201ENST00000199706 SNX4O95219 450 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 PTGER1P34995 402 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 CLDN8P56748 225 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 GPR85P60893 370 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 SRSF11Q05519 484 aaKnown RBP16.01■□□□□ 0.15
MRPL28-201ENST00000199706 SNTA1Q13424 505 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 ZNF385BQ569K4 471 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 FAM47EQ6ZV65 393 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 NUP54Q7Z3B4 507 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 SIMC1Q8NDZ2 872 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 FAM13CQ8NE31 585 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 PSMA8Q8TAA3 256 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 PRR7Q8TB68 274 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 SPPL2AQ8TCT8 520 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 COQ8BQ96D53 544 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 TTTY12Q9BZ98 90 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 AKTIPQ9H8T0 292 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 FOLH1BQ9HBA9 442 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 QPCTLQ9NXS2 382 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 GIMAP2Q9UG22 337 aa16.01■□□□□ 0.15
MRPL28-201ENST00000199706 NINQ8N4C6 2090 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 A0A0G2JMM0 328 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 A0A1W2PPB8 328 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 A0A1W2PRS3 328 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 KIR3DP1A8MWS1 328 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 NPIPA5E9PKD4 350 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 UPK1AO00322 258 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 AKAP10O43572 662 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 ABCB1P08183 1280 aaPredicted RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 PER3P56645 1201 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 MRPS22P82650 360 aaKnown RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 PLCXD2Q0VAA5 305 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 CYP27C1Q4G0S4 372 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 TTMPQ5BVD1 217 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 CMPK2Q5EBM0 449 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 TMEM107Q6UX40 140 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.153e-7■■■□□ 14.8
MRPL28-201ENST00000199706 FAM109AQ8N4B1 249 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 CLHC1Q8NHS4 586 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 MGARPQ8TDB4 240 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 RNF138Q8WVD3 245 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 GFM2Q969S9 779 aaKnown RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 OMA1Q96E52 524 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 LMF2Q9BU23 707 aaKnown RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 C1orf50Q9BV19 199 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 ANGPTL4Q9BY76 406 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 BHLHE41Q9C0J9 482 aaPredicted RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 PROK2Q9HC23 129 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 NEUROD4Q9HD90 331 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 ZFP64Q9NPA5 681 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 SH3BP4Q9P0V3 963 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 NPIPA1Q9UND3 350 aa16■□□□□ 0.15
MRPL28-201ENST00000199706 SEC23IPQ9Y6Y8 1000 aaKnown RBP16■□□□□ 0.15
MRPL28-201ENST00000199706 PINLYPA6NC86 204 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 SLC19A2O60779 497 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 TRIM3O75382 744 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 AGFG2O95081 481 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 LRATO95237 230 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 IGHG3P01860 377 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 G6PDP11413 515 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 LBPP18428 481 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 FBXW4P57775 412 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 KCNK10P57789 538 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 PPIAP62937 165 aaKnown RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 KCNJ2P63252 427 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 PSG6Q00889 435 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 EFR3AQ14156 821 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 DPY19L1Q2PZI1 675 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 CPTPQ5TA50 214 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 MTFR2Q6P444 385 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ARHGAP11AQ6P4F7 1023 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ZCCHC12Q6PEW1 402 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 PAOXQ6QHF9 649 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 TMEM64Q6YI46 380 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ZNF551Q7Z340 670 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 CHERPQ8IWX8 916 aaKnown RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 CEP70Q8NHQ1 597 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 SSC4DQ8WTU2 575 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 HGDQ93099 445 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 CIDECQ96AQ7 238 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ZBTB9Q96C00 473 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 MAGED4Q96JG8 741 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ZNF597Q96LX8 424 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 C7orf26Q96N11 449 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 NUF2Q9BZD4 464 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 ZNF703Q9H7S9 590 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 PNPOQ9NVS9 261 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 TUBA8Q9NY65 449 aaPredicted RBP15.99■□□□□ 0.15
MRPL28-201ENST00000199706 B4GALT7Q9UBV7 327 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 OSGIN2Q9Y236 505 aa15.99■□□□□ 0.15
MRPL28-201ENST00000199706 SETXQ7Z333 2677 aaKnown RBP15.98■□□□□ 0.15
MRPL28-201ENST00000199706 OR14I1A6ND48 311 aa15.98■□□□□ 0.15
MRPL28-201ENST00000199706 LRRC3CA6NJW4 275 aa15.98■□□□□ 0.15
MRPL28-201ENST00000199706 SDHDO14521 159 aa15.98■□□□□ 0.15
MRPL28-201ENST00000199706 HS6ST1O60243 411 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms