RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 KLHL6Q8WZ60 621 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SLC9A6Q92581 669 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 LGALS12Q96DT0 336 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 C10orf90Q96M02 699 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 IL4I1Q96RQ9 567 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PRRG3Q9BZD7 231 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 KLHL25Q9H0H3 589 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 QRSL1Q9H0R6 528 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ANKHQ9HCJ1 492 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CTPS2Q9NRF8 586 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 HRASLS2Q9NWW9 162 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 REV1Q9UBZ9 1251 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 NDOR1Q9UHB4 597 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF860A6NHJ4 632 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 H0YGG7 62 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 H3BQ06 376 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 NARSO43776 548 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PTHP01270 115 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 IGHV4-34P06331 123 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 HSMCR30P0CW71 290 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 THEGLP0DJG4 465 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SMIM10L1P0DMW3 83 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CPMP14384 443 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PORP16435 677 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF12P17014 697 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 NUDT1P36639 197 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 LIPAP38571 399 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 OPRL1P41146 370 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 AVPR1BP47901 424 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 MAN2A2P49641 1150 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ARF3P61204 181 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 UBE2IP63279 158 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TUBA1BP68363 451 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ST3GAL3Q11203 375 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 LARS2Q15031 903 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TRAM2Q15035 370 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 MED22Q15528 200 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 INAVAQ3KP66 663 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 EIPR1Q53HC9 387 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ARMCX4Q5H9R4 360 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TMEM201Q5SNT2 666 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 MEDAGQ5VYS4 303 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 C12orf73Q69YU5 71 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PLAG1Q6DJT9 500 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CD300LDQ6UXZ3 194 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PLEKHM3Q6ZWE6 761 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 USP43Q70EL4 1123 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TUBA1AQ71U36 451 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RNF44Q7L0R7 432 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 COMTD1Q86VU5 262 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 VRK2Q86Y07 508 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RBM12BQ8IXT5 1001 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SLC22A18ASQ8N1D0 253 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SLC15A4Q8N697 577 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 OR7G2Q8NG99 324 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 OR52P1PQ8NH57 321 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TEX47Q8TBZ9 253 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 DYNC2LI1Q8TCX1 351 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SLC37A2Q8TED4 501 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 GIMAP5Q96F15 307 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 TOE1Q96GM8 510 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SMIM10Q96HG1 83 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ARHGDIGQ99819 225 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 WFDC6Q9BQY6 131 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 FUZQ9BT04 418 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 CDCA4Q9BXL8 241 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RSPO3Q9BXY4 272 aaPredicted RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 DCSTAMPQ9H295 470 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ANKRD19PQ9H560 264 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 ANKRA2Q9H9E1 313 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 DNAJC27Q9NZQ0 273 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 PILRAQ9UKJ1 303 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 IFT52Q9Y366 437 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 RPL36Q9Y3U8 105 aaKnown RBP7.75□□□□□ -1.17
VAMP3-201ENST00000054666 WDR45Q9Y484 360 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 KLK4Q9Y5K2 254 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SLC22A7Q9Y694 548 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 KCNE3Q9Y6H6 103 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 SCN3AQ9NY46 2000 aa7.75□□□□□ -1.17
VAMP3-201ENST00000054666 BRWD1Q9NSI6 2320 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 CPSF4LA6NMK7 179 aaKnown RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 FAM170BA6NMN3 283 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 M0R082 166 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ENTPD6O75354 484 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 PVRP15151 417 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MMP11P24347 488 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SMSP52788 366 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 PDX1P52945 283 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 RAB15P59190 212 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 HHEXQ03014 270 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 RUNX2Q13950 521 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 IRF3Q14653 427 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MANEAQ5SRI9 462 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 C6orf132Q5T0Z8 1188 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF730Q6ZMV8 503 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 USP53Q70EK8 1073 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SLC46A3Q7Z3Q1 461 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 PARGQ86W56 976 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms