RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Vmn1r210Q8R274 306 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr397Q8VEZ6 315 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pth2rQ91V95 546 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 P2yr13Q9D8I2 337 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Izumo1Q9D9J7 397 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr945Q9EQB5 319 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rdh14Q9ERI6 334 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 C1galt1c1Q9JMG2 316 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rpl23a-ps3A0A140T8M7 156 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mup10A2BIN1 180 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kcnk15B2RVL1 343 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 PiggD3Z3Y1 983 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Bcl2l11O54918 196 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 MbP04247 154 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Mup2P11589 180 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ca6P18761 317 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rpl23aP62751 156 aaKnown RBP8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fezf1Q0VDQ9 475 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Lpar5Q149R9 372 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc17a7Q3TXX4 560 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Aifm2Q8BUE4 373 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fam24aQ8CF27 98 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fam110cQ8VE94 421 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rtn4ip1Q924D0 396 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Barx1Q9ER42 254 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Extl1Q9JKV7 669 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fbxo6Q9QZN4 295 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Stfa3P35173 103 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 IdsQ08890 552 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gpr15Q0VDU3 360 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ptpmt1Q66GT5 193 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Susd4Q8BH32 490 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ankrd34cQ8BLB8 534 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fastkd3Q8BSN9 661 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rnf26Q8BUH7 424 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pdcd2lQ8C5N5 364 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fn3krpQ8K274 309 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ranbp3Q9CT10 491 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Eral1Q9CZU4 437 aaKnown RBP8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 GabrqQ9JLF1 638 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr2Q9QWU6 327 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm4881A0A140LIR9 352 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm44501A8R0T9 150 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm3149E9PW52 257 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm9964E9Q9S5 144 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm8362K7N6Y6 257 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sec61gP60060 68 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Q3KQP7 184 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 KdsrQ6GV12 332 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ffar4Q7TMA4 361 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gpr4Q8BUD0 365 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 AbraQ8BUZ1 375 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gucd1Q8BZI6 239 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr780Q8VEU0 312 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr983Q8VG90 315 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Apobec3Q99J72 440 aaKnown RBP8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sema4fQ9Z123 777 aa8.54□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm20431E9PY39 371 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr889L7N1Y6 314 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pax6P63015 422 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm11437Q5QR91 290 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Sf3a2Q62203 475 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Lamp3Q7TST5 411 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tmem179Q8BHH9 233 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Esco2Q8CIB9 592 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rnh1Q91VI7 456 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 S1pr5Q91X56 400 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Ube2v1Q9CZY3 147 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Prpsap1Q9D0M1 356 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Serpina9Q9D7D2 418 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm45713A0A1B0GS68 446 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr663A0A1B0GSI9 319 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fnd3c2A2AP83 941 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 PpigA2AR02 752 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 C2cd6E9Q152 557 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tmem265E9Q8G3 109 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Tm4sf19E9Q9H8 206 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Scgb1b19F6WYW0 93 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kcnk4O88454 398 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 BsgP18572 389 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rpl13aP19253 203 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Rnf133Q14B02 382 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Irf4Q64287 450 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Svs6Q64356 99 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Cdc14bQ6PFY9 485 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Fam107aQ78TU8 144 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Celf3Q8CIN6 465 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 PhykplQ8R1K4 467 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Olfr1347Q8VF33 319 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Acot7Q91V12 381 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Pcdhb1Q91Y08 818 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Glyr1Q922P9 546 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Uqcrfs1Q9CR68 274 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Nrip2Q9JHR9 270 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Oaz3Q9R109 243 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Gm9774A0A0A6YVU8 407 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Kansl3A2RSY1 903 aaKnown RBP8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Vmn2r61L7N2B8 865 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 Slc16a7O70451 484 aa8.53□□□□□ -1.04
Clcn3-202ENSMUST00000056508 ArP19091 899 aa8.53□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms