RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Kcns3Q8BQZ8 491 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mrpl22Q8BU88 206 aaKnown RBP8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ubqln1Q8R317 582 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Lipt1Q8VCM4 373 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fam110cQ8VE94 421 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr935Q8VG16 308 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr763Q8VGC1 309 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr582Q8VGV9 319 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 GlyatQ91XE0 296 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mgme1Q9CXC3 338 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Erv3Q9DAX3 200 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mrpl46Q9EQI8 283 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Znf207Q9JMD0 495 aaKnown RBP8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Enpp2Q9R1E6 862 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Atp6v1g2Q9WTT4 118 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Bod1lE9Q6J5 3032 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Trav1A0A075B5Z4 110 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm28363A0A087WQW2 129 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 1810010D01RikA0A1L1SR87 51 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm8267E9Q207 261 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 4930451I11RikE9Q9R3 111 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Rb1P13405 921 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pcsk2P21661 637 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 FshrP35378 692 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Idh2P54071 452 aaKnown RBP8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Lzts1P60853 599 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fbxo40P62932 710 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cct7P80313 544 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ugt2b36Q3UEP4 530 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 MthfsdQ3URQ7 372 aaKnown RBP8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Bahd1Q497V6 772 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 NnatQ61979 81 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Defa17Q64016 82 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Adamts16Q69Z28 1222 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp933Q6PEE4 468 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr169Q7TS53 313 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm9758Q80ZT2 255 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc36a3Q811P0 477 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 NarsQ8BP47 559 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Yod1Q8CB27 343 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Q8CF31 99 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Coq6Q8R1S0 476 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pex12Q8VC48 359 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Clec14aQ8VCP9 459 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pcdh18Q8VHR0 1134 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 OptcQ920A0 328 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ifi44lQ9BDB7 447 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Idh3aQ9D6R2 366 aaKnown RBP8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Vmn1r40Q9EQ46 310 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc6a14Q9JMA9 638 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc7a8Q9QXW9 531 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Srd5a3Q9WUP4 330 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fkbp9Q9Z247 570 aa8.17□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ranbp2Q9ERU9 3053 aaKnown RBP8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slfn9B1ARD6 910 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr292F8VQ84 308 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm4141K9J7H2 306 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm20878L7N244 103 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Vmn2r45L7N2B5 852 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Kif1cO35071 1100 aaKnown RBP8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 P01637 128 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Atxn1P54254 791 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Lrpap1P55302 360 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 VldlrP98156 873 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Epha4Q03137 986 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gdf9Q07105 441 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pdap1Q3UHX2 181 aaKnown RBP8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Atf7ip2Q3UL97 452 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 MyrfQ3UR85 1138 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Q5EBG8 199 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Slc30a1Q60738 503 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Grm7Q68ED2 915 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm5416Q6IE28 97 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Doxl2Q6IMK7 723 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Psd2Q6P1I6 770 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Olfr814Q7TRH4 310 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Catsper3Q80W99 395 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Mettl2Q8BMK1 389 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Znf574Q8BY46 900 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gpr1Q8K087 353 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Esrp2Q8K0G8 717 aaKnown RBP8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ly6g5cQ8K1T5 149 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Crb3Q8QZT4 113 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Rnf8Q8VC56 488 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Ffar2Q8VCK6 330 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Pcdhga4Q91XY4 930 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Q9CXL3 195 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Spns3Q9D232 514 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 9030624G23RikQ9D308 155 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Srxn1Q9D975 136 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 MyotQ9JIF9 496 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp969A2ART2 485 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Zfp973A2BE20 318 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Cisd3B1AR13 137 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Vmn2r50E9PW61 861 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Gm17175E9Q528 179 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Arhgap40E9Q6X9 672 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Colca2F8VPY8 239 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 1700014D04RikJ3QMS2 983 aa8.16□□□□□ -1.1
Trim39-201ENSMUST00000042717 Fth1P09528 182 aa8.16□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms