RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 A0A1W2PS29 197 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ANKRD34BA5PLL1 514 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 FRS3O43559 492 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 OR1F1O43749 312 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 MTRF1O75570 445 aaKnown RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LALBAP00709 142 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SERPIND1P05546 499 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ACRP10323 421 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 APEX1P27695 318 aaKnown RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SOX18P35713 384 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 PPM1AP35813 382 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC9A3P48764 834 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 EPHA5P54756 1037 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 WNT4P56705 351 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 FABP5Q01469 135 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 PLK5Q496M5 336 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF793Q6ZN11 406 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 DCUN1D3Q8IWE4 304 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 RASSF5Q8WWW0 418 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 RNF170Q96K19 258 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZNF514Q96K75 400 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC35G5Q96KT7 338 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 AMDHD1Q96NU7 426 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 A0A087WUU8 490 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ABHD14A-ACY1A0A1B0GW23 586 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 POLR1CO15160 346 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GUCY1B2O75343 617 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LIMS3P0CW19 117 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LIMS4P0CW20 117 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ADRB3P13945 408 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 CSF2RAP15509 400 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 BUD31P41223 144 aaPredicted RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ST8SIA6P61647 398 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 CDK10Q15131 360 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 PRICKLE2Q7Z3G6 844 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 AMZ2Q86W34 360 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 NUDT13Q86X67 352 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ASCC1Q8N9N2 400 aaKnown RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC7A6Q92536 515 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 C17orf62Q9BQA9 187 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SLC22A4Q9H015 551 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 WASH6PQ9NQA3 447 aa13.03□□□□□ -0.32
PHGDH-233ENST00000642021 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
PHGDH-233ENST00000642021 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 NDUFS4O43181 175 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 SEC14L5O43304 696 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 PRNPP04156 253 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 RB1P06400 928 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 ERGP11308 486 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 SLC6A11P48066 632 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 CCR8P51685 355 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 DUSP2Q05923 314 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 DPTQ07507 201 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 INSL4Q14641 139 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 PYDC2Q56P42 97 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 C3orf38Q5JPI3 329 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 ENTPD8Q5MY95 495 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 PDZK1Q5T2W1 519 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 RDH10Q8IZV5 341 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 KLK6Q92876 244 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 C16orf58Q96GQ5 468 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 KLHL31Q9H511 634 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 ANKRA2Q9H9E1 313 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 ACSS1Q9NUB1 689 aaPredicted RBP13.02□□□□□ -0.32
PHGDH-233ENST00000642021 COMMD3Q9UBI1 195 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 NDRG2Q9UN36 371 aaKnown RBP13.02□□□□□ -0.32
PHGDH-233ENST00000642021 SNX7Q9UNH6 387 aa13.02□□□□□ -0.32
PHGDH-233ENST00000642021 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 KIAA0355O15063 1070 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 MYL12AP19105 171 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 RPS5P46782 204 aaKnown RBP13.02□□□□□ -0.33
PHGDH-233ENST00000642021 REEP5Q00765 189 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 EIF2B5Q13144 721 aaKnown RBP13.02□□□□□ -0.33
PHGDH-233ENST00000642021 TPBGQ13641 420 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 LASP1Q14847 261 aaKnown RBP13.02□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF628Q5EBL2 1059 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 CLEC12AQ5QGZ9 265 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 RGMAQ96B86 450 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 DEPDC7Q96QD5 511 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 PELI2Q9HAT8 420 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms