RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PRRC1Q96M27 445 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 OR2A5Q96R48 311 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 WDR12Q9GZL7 423 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 DCSTAMPQ9H295 470 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 SLC38A1Q9H2H9 487 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 C6orf106Q9H6K1 298 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 ZBTB20Q9HC78 741 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 DNAAF2Q9NVR5 837 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 P2RX6O15547 441 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 TNFSF14O43557 240 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ASNA1O43681 348 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 CTSVO60911 334 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 CNOT3O75175 753 aaKnown RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 SLC35G6P0C7Q6 338 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 PIPP12273 146 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 UGT2B7P16662 529 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 MMP11P24347 488 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 UGT2B10P36537 528 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 LTBRP36941 435 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 SFSWAPQ12872 951 aaKnown RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ALG11Q2TAA5 492 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 PLAG1Q6DJT9 500 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 DCDC5Q6ZRR9 648 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 WDR53Q7Z5U6 358 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 MORN4Q8NDC4 146 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 OR4K5Q8NGD3 323 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 KLHL6Q8WZ60 621 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 GIMAP5Q96F15 307 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ARMC7Q9H6L4 198 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 KCMF1Q9P0J7 381 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 BRWD1Q9NSI6 2320 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 LRRC72A6NJI9 287 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 SULT1C4O75897 302 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 SMIM10L1P0DMW3 83 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 POLR2CP19387 275 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 RAB15P59190 212 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 TNFRSF17Q02223 184 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
PHGDH-211ENST00000641213 CHRNEQ04844 493 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF311Q5JNZ3 666 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 TMEM201Q5SNT2 666 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 FCRL6Q6DN72 434 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 CASP12Q6UXS9 341 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 CD300LDQ6UXZ3 194 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF367Q7RTV3 350 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ZER1Q7Z7L7 766 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ZG16BQ96DA0 208 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 SMIM10Q96HG1 83 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 ACTRT3Q9BYD9 372 aa16.03■□□□□ 0.16
PHGDH-211ENST00000641213 TDRD6O60522 2096 aaKnown RBP16.02■□□□□ 0.16
PHGDH-211ENST00000641213 RPLP0P05388 317 aaKnown RBP16.02■□□□□ 0.15
PHGDH-211ENST00000641213 BMP4P12644 408 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TNNI3P19429 210 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 CPN2P22792 545 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 RGS6P49758 472 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TUBA1BP68363 451 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 LSM11P83369 360 aaKnown RBP eCLIP16.02■□□□□ 0.15
PHGDH-211ENST00000641213 COX10Q12887 443 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 GPR18Q14330 331 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TUBA1AQ71U36 451 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 IQCHQ86VS3 1027 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 CENPSQ8N2Z9 138 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 MFSD4AQ8N468 514 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 LINC00471Q8N535 108 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 DRAXINQ8NBI3 349 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-211ENST00000641213 ZCCHC10Q8TBK6 192 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 COX4I2Q96KJ9 171 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 Q96MT0 163 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TRNT1Q96Q11 434 aaKnown RBP16.02■□□□□ 0.15
PHGDH-211ENST00000641213 OR5M11Q96RB7 305 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 SERINC2Q96SA4 455 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 CTPS2Q9NRF8 586 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.15
PHGDH-211ENST00000641213 RHBDL2Q9NX52 303 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 GIN1Q9NXP7 522 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 DNAJC27Q9NZQ0 273 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 LIPT1Q9Y234 373 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 IFT52Q9Y366 437 aa16.02■□□□□ 0.15
PHGDH-211ENST00000641213 TCRBV21S2A2A0A5A6 115 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 GSAPA4D1B5 854 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 OR6C74A6NCV1 312 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 SYT5O00445 386 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 ALPPP05187 535 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 HSMCR30P0CW71 290 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 YPEL5P62699 121 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 OLR1P78380 273 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 SUZ12Q15022 739 aaKnown RBP16.01■□□□□ 0.15
PHGDH-211ENST00000641213 DEFB134Q4QY38 66 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 C6orf132Q5T0Z8 1188 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 C1orf94Q6P1W5 598 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 FIGLAQ6QHK4 219 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 FAM111BQ6SJ93 734 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 VRK2Q86Y07 508 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 LRRC25Q8N386 305 aaPredicted RBP16.01■□□□□ 0.15
PHGDH-211ENST00000641213 OR7G2Q8NG99 324 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 OR10G6Q8NH81 332 aa16.01■□□□□ 0.15
PHGDH-211ENST00000641213 SLC35A4Q96G79 324 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms