RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 GPR137Q96N19 417 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 RNF32Q9H0A6 362 aa13.01□□□□□ -0.33
SCARB2-227ENST00000640957 FAM120CQ9NX05 1096 aaKnown RBP13.01□□□□□ -0.33
SCARB2-227ENST00000640957 SH3D21A4FU49 640 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 RHCEP18577 417 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ACRV1P26436 265 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 SHC1P29353 583 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 TALDO1P37837 337 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 WNT4P56705 351 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 HTRA3P83110 453 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PUDPQ08623 228 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 GRIN2CQ14957 1233 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 SF3A2Q15428 464 aaKnown RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 HSDL2Q6YN16 418 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 COMTD1Q86VU5 262 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 SRFBP1Q8NEF9 429 aaKnown RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 DUSP18Q8NEJ0 188 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 AP3S1Q92572 193 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ORAI1Q96D31 301 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 CHST8Q9H2A9 424 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ISG20L2Q9H9L3 353 aaKnown RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 TMEM5Q9Y2B1 443 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PCDHB1Q9Y5F3 818 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 E9PQ18 207 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 GABRPO00591 440 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 COCHO43405 550 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 SLC2A10O95528 541 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 RAB36O95755 333 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 DHFRP00374 187 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 URODP06132 367 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PPP3R1P63098 170 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ST3GAL2Q16842 350 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 MPEG1Q2M385 716 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ARL14EPQ8N8R7 260 aaPredicted RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 OR5D16Q8NGK9 328 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF582Q96NG8 517 aaPredicted RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 KCTD5Q9NXV2 234 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 MAGEB4O15481 346 aaPredicted RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 TPOP07202 933 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 FKBP1BP68106 108 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 TXNDC8Q6A555 127 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 GPR139Q6DWJ6 353 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 SLC30A6Q6NXT4 461 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 CLDN22Q8N7P3 220 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 OR8D4Q8NGM9 314 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ASZ1Q8WWH4 475 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 XAGE5Q8WWM1 108 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 GIMAP1Q8WWP7 306 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 MCOLN1Q9GZU1 580 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 SMG9Q9H0W8 520 aaKnown RBP13□□□□□ -0.33
SCARB2-227ENST00000640957 KCNN2Q9H2S1 579 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PIGUQ9H490 435 aa13□□□□□ -0.33
SCARB2-227ENST00000640957 PROM1O43490 865 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 HCN1O60741 890 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 CBX7O95931 251 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 ELAVL4P26378 380 aaKnown RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 NUP62P37198 522 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 PFN3P60673 137 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 UBE2MP61081 183 aaKnown RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 STXBP1P61764 594 aaKnown RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 B4GALNT1Q00973 533 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 PLK5Q496M5 336 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 OR8J2Q8NGG1 315 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 OR8J1Q8NGP2 316 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 RFT1Q96AA3 541 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 FUBP3Q96I24 572 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 CACNG6Q9BXT2 260 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 SDHAF2Q9NX18 166 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 NPIPB15A6NHN6 443 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 KDELR3O43731 214 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 OAZ2O95190 189 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 DEFA5Q01523 94 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 ADAM15Q13444 863 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 SLC6A19Q695T7 634 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 PODNL1Q6PEZ8 512 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 LRFN4Q6PJG9 635 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 SMARCD3Q6STE5 483 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 THOC6Q86W42 341 aaKnown RBP12.99□□□□□ -0.33
SCARB2-227ENST00000640957 TET1Q8NFU7 2136 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 GPR32P1Q8NGA4 272 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 FCRL4Q96PJ5 515 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 PPA2Q9H2U2 334 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 MED20Q9H944 212 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 C1GALT1Q9NS00 363 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 SH2B3Q9UQQ2 575 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 RASD1Q9Y272 281 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 CSNK1G3Q9Y6M4 447 aa12.99□□□□□ -0.33
SCARB2-227ENST00000640957 H3BSH0 61 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 IFNA7P01567 189 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 ZNF8P17098 575 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-227ENST00000640957 TBXA2RP21731 343 aa12.98□□□□□ -0.33
SCARB2-227ENST00000640957 FNTBP49356 437 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms