RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 A4GALTQ9NPC4 353 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 NDUFB11Q9NX14 153 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.21
SCARB2-221ENST00000640341 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CD8B2A6NJW9 211 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CD8BP10966 210 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 GJA8P48165 433 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 APOBEC4Q8WW27 367 aaKnown RBP13.76□□□□□ -0.21
SCARB2-221ENST00000640341 C3orf14Q9HBI5 128 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 LHX9Q9NQ69 397 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 DSPPQ9NZW4 1301 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 TRBV23OR9-2A0A075B6M9 112 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 PAK4O96013 591 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-221ENST00000640341 FGBP02675 491 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 NTSP30990 170 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CTNNB1P35222 781 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 LIMK1P53667 647 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CLDN2P57739 230 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 GPR50Q13585 617 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 FLYWCH1Q4VC44 716 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 C18orf63Q68DL7 685 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 TBC1D19Q8N5T2 526 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 WDR34Q96EX3 536 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
SCARB2-221ENST00000640341 SAP130Q9H0E3 1048 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CSNK1G3Q9Y6M4 447 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 F5P12259 2224 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 A0A075B6Q4 140 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 SLC30A4O14863 429 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 CSF3P09919 207 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 MSL3P1P0C860 447 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 SDHBP21912 280 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 RFX3P48380 749 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 MAN2A2P49641 1150 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 MLLT11Q13015 90 aaPredicted RBP13.76□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF311Q5JNZ3 666 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 SNAP47Q5SQN1 464 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 PIP5KL1Q5T9C9 394 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 MEDAGQ5VYS4 303 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 TRIQKQ629K1 86 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 C12orf73Q69YU5 71 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 LCTLQ6UWM7 567 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 C19orf18Q8NEA5 215 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 GANCQ8TET4 914 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 MIXL1Q9H2W2 232 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 TMEM245Q9H330 911 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 DEC1Q9P2X7 70 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 PLEKHM1Q9Y4G2 1056 aa13.76□□□□□ -0.21
SCARB2-221ENST00000640341 EYSQ5T1H1 3165 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 COL4A6Q14031 1691 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 A8MVJ9 347 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 HPGDSO60760 199 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 GUCY1B2O75343 617 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 PAPLNO95428 1278 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 CCL5P13501 91 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 CXCR2P25025 360 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 MTNR1AP48039 350 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SMSP52788 366 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 WNT4P56705 351 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 C19orf48Q6RUI8 117 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF793Q6ZN11 406 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 PRICKLE2Q7Z3G6 844 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 NRSN1Q8IZ57 195 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 TMEM145Q8NBT3 493 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SETD7Q8WTS6 366 aaKnown RBP13.75□□□□□ -0.21
SCARB2-221ENST00000640341 POF1BQ8WVV4 589 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 TP53INP1Q96A56 240 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SLC25A46Q96AG3 418 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 AMDHD1Q96NU7 426 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FCRL4Q96PJ5 515 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 DPEP2Q9H4A9 486 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SLC35C2Q9NQQ7 365 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 CLEC4AQ9UMR7 237 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 GPR55Q9Y2T6 319 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-221ENST00000640341 ZNF106Q9H2Y7 1883 aaKnown RBP13.75□□□□□ -0.21
SCARB2-221ENST00000640341 A0A087WUU8 490 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FKTNO75072 461 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SLC2A10O95528 541 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
SCARB2-221ENST00000640341 GNSP15586 552 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 MYL9P24844 172 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SMIM11AP58511 58 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 FABP5Q01469 135 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 P2RY14Q15391 338 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 SLC35F1Q5T1Q4 408 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 LRRTM4Q86VH4 590 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 LINC01555Q8NAE3 123 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 CREB3L4Q8TEY5 395 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 ICKQ9UPZ9 632 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 ATG4BQ9Y4P1 393 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 NOTCH4Q99466 2003 aa13.75□□□□□ -0.21
SCARB2-221ENST00000640341 OR6C70A6NIJ9 312 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms