RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 VPS39Q96JC1 886 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 F2RL3Q96RI0 385 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 STMN4Q9H169 189 aaPredicted RBP9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 RPF2Q9H7B2 306 aaKnown RBP9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 PRDM7Q9NQW5 492 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 SYBUQ9NX95 663 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 MS4A12Q9NXJ0 267 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 TMEFF2Q9UIK5 374 aaPredicted RBP9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 SOX13Q9UN79 622 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 VWFP04275 2813 aa9.84□□□□□ -0.83
PTP4A1-207ENST00000639568 SEC14L5O43304 696 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 PPM1BO75688 479 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 ALX3O95076 343 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 BMP4P12644 408 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 NAGAP17050 411 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 IL32P24001 234 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 ADH6P28332 368 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 SCGB2A2Q13296 93 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 GUSBP1Q15486 140 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 SGCBQ16585 318 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 AP5B1Q2VPB7 878 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 IQCCQ4KMZ1 466 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 TMEM81Q6P7N7 255 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 PAQR3Q6TCH7 311 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 ZNF619Q8N2I2 560 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 SNX31Q8N9S9 440 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 SEMA6DQ8NFY4 1073 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 ZNF418Q8TF45 676 aaPredicted RBP9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 FAM216AQ8WUB2 273 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 GFM2Q969S9 779 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 PIMREGQ9BSJ6 248 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 TBCDQ9BTW9 1192 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 CBLN4Q9NTU7 201 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 TAS2R13Q9NYV9 303 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 PAK5Q9P286 719 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 MRPS18CQ9Y3D5 142 aaKnown RBP9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 FREM3P0C091 2139 aa9.83□□□□□ -0.84
PTP4A1-207ENST00000639568 ESYT3A0FGR9 886 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 PRAMEF25A6NGN4 478 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 H0YC42 278 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 TRIM77I1YAP6 450 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 RAMP1O60894 148 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 ENO2P09104 434 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 ATP5A1P25705 553 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 SSTR4P31391 388 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 MAGEA1P43355 309 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 EFNA4P52798 201 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 NAP1L1P55209 391 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 TPD52P55327 224 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 IL2P60568 153 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 RPS3AP61247 264 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 BASP1P80723 227 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 DHX34Q14147 1143 aaKnown RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 TAB1Q15750 504 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 DEPDC1Q5TB30 811 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 PRUNE1Q86TP1 453 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 KCTD4Q8WVF5 259 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 ATG4AQ8WYN0 398 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 ALG3Q92685 438 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 GMPPAQ96IJ6 420 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 NODALQ96S42 347 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 PITHD1Q9GZP4 211 aaPredicted RBP9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 FOLH1BQ9HBA9 442 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 FBXL2Q9UKC9 423 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 MED12LQ86YW9 2145 aa9.82□□□□□ -0.84
PTP4A1-207ENST00000639568 MED12Q93074 2177 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 DPRXA6NFQ7 191 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 EFCAB8A8MWE9 144 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 NDUFS8O00217 210 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 ZIC3O60481 467 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 AQP8O94778 261 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 HAUS5O94927 633 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 TPM1P09493 284 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 ETS1P14921 441 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 HIST1H1TP22492 207 aaPredicted RBP9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 CNTFP26441 200 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 TTKP33981 857 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 PTGDSP41222 190 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 SLC1A2P43004 574 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 SSR2P43308 183 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 NR4A2P43354 598 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 PDLIM4P50479 330 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 SUCLG1P53597 346 aaKnown RBP9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 IRF9Q00978 393 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 SLAMF1Q13291 335 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 AWAT1Q58HT5 328 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 C6orf163Q5TEZ5 329 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 RAET1LQ5VY80 246 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 OR5M10Q6IEU7 315 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 FIGNL1Q6PIW4 674 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 ZNF793Q6ZN11 406 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 SLCO4C1Q6ZQN7 724 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 ATG4DQ86TL0 474 aaPredicted RBP9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 CCDC25Q86WR0 208 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 FBXL14Q8N1E6 418 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 C17orf47Q8NEP4 570 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 PIWIL2Q8TC59 973 aaKnown RBP9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 HGDQ93099 445 aa9.81□□□□□ -0.84
PTP4A1-207ENST00000639568 ADIPOR1Q96A54 375 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms