RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 CTSKP43235 329 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TSFMP43897 325 aaKnown RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ENTPD1P49961 510 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CCR5P51681 352 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 RPS6KA3P51812 740 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PDX1P52945 283 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TMBIM6P55061 237 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 MLLT10P55197 1068 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CXCR4P61073 352 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PRR5P85299 388 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TGM3Q08188 693 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 DYNC1I2Q13409 638 aaKnown RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 FZD5Q13467 585 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TDGQ13569 410 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 UBXN2BQ14CS0 331 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 DCST1Q5T197 706 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CCNJQ5T5M9 372 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PODNL1Q6PEZ8 512 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SYT13Q7L8C5 426 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 BCDIN3DQ7Z5W3 292 aaKnown RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TSTD1Q8NFU3 115 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 OR4K14Q8NGD5 310 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ZDHHC1Q8WTX9 485 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 GAB3Q8WWW8 586 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 GGHQ92820 318 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CDS1Q92903 461 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ARSGQ96EG1 525 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 IL4I1Q96RQ9 567 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 GPA33Q99795 319 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 RBCK1Q9BYM8 510 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ACOT13Q9NPJ3 140 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 MAN2C1Q9NTJ4 1040 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 GIMAP4Q9NUV9 329 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 POT1Q9NUX5 634 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TAS2R16Q9NYV7 291 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 REV1Q9UBZ9 1251 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 FTSJ1Q9UET6 329 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 WDFY3Q8IZQ1 3526 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PCDH15Q96QU1 1955 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 IGHV1OR15-9A0A0B4J2B8 117 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 OR2W5A6NFC9 320 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SGK494L7N484 410 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 B3GALT2O43825 422 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 FGF17O60258 216 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 LGI1O95970 557 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 IGLV3-19P01714 112 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 STSP08842 583 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 GLULP15104 373 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ALOX12P18054 663 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CRISP1P54107 249 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 NUP107P57740 925 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SHC2P98077 582 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TARDBPQ13148 414 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TUBA3CQ13748 450 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CTF1Q16619 201 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 MLIPQ5VWP3 458 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 KRT73Q86Y46 540 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 LRRC25Q8N386 305 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 CLIP4Q8N3C7 705 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 OR56A1Q8NGH5 318 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SFXN5Q8TD22 340 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 RORBQ92753 470 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 RPL3LQ92901 407 aaKnown RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 RERGQ96A58 199 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SERINC2Q96SA4 455 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PHOX2BQ99453 314 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 COPS4Q9BT78 406 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 ZSCAN32Q9NX65 697 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PSME2Q9UL46 239 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 TMCC3Q9ULS5 477 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 PCDHGB1Q9Y5G3 927 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 SLC22A7Q9Y694 548 aa8.38□□□□□ -1.07
NECAP1-217ENST00000639276 KRBA1A5PL33 1030 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 TRIM64BA6NI03 449 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 MED26O95402 600 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 ACVR2AP27037 513 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 ARFIP1P53367 373 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
NECAP1-217ENST00000639276 SYT16Q17RD7 645 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 ZNF311Q5JNZ3 666 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 PGBD2Q6P3X8 592 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 BHLHB9Q6PI77 547 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 DNAJC22Q8N4W6 341 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 IQCF1Q8N6M8 205 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 AVL9Q8NBF6 648 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 CAMKVQ8NCB2 501 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 CNDP2Q96KP4 475 aaKnown RBP8.37□□□□□ -1.07
NECAP1-217ENST00000639276 SIGLEC11Q96RL6 698 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 FUZQ9BT04 418 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 ALOXE3Q9BYJ1 711 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 C3orf14Q9HBI5 128 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 BCL2L10Q9HD36 194 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 IMPAD1Q9NX62 359 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 MS4A12Q9NXJ0 267 aa8.37□□□□□ -1.07
NECAP1-217ENST00000639276 PSORS1C1Q9UIG5 152 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms