RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CCNK	O75909	580 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CLPX	O76031	633 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GABRG2	P18507	467 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ELK4	P28324	431 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HOXC8	P31273	242 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CSNK1D	P48730	415 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ARG2	P78540	354 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CHAF1B	Q13112	559 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	EXOC3L2	Q2M3D2	409 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	C1QTNF12	Q5T7M4	302 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CNTN4	Q8IWV2	1026 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CNIH3	Q8TBE1	160 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PATE1	Q8WXA2	126 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	AP3S1	Q92572	193 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PTGES2	Q9H7Z7	377 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ING3	Q9NXR8	418 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KCND3	Q9UK17	655 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ST14	Q9Y5Y6	855 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FUOM	A2VDF0	154 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	EIF3F	O00303	357 aa	Predicted RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CPNE6	O95741	557 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HMGN2	P05204	90 aa	Known RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	IL12A	P29459	219 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	XCR1	P46094	333 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TAP2	Q03519	686 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RBPJ	Q06330	500 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF423	Q2M1K9	1284 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HDDC2	Q7Z4H3	204 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GALNTL5	Q7Z4T8	443 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR9A4	Q8NGU2	314 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CREB3L4	Q8TEY5	395 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ECHDC3	Q96DC8	303 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TM9SF2	Q99805	663 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TMEM185B	Q9H7F4	350 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KCNK13	Q9HB14	408 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SRA1	Q9HD15	236 aa	Known RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CD320	Q9NPF0	282 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RGPD4	Q7Z3J3	1758 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FAM240B	A0A1B0GVZ2	78 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997		M0R3H8	397 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CD2	P06729	351 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF3	P17036	446 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NR0B1	P51843	470 aa	Known RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FADD	Q13158	208 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PIN1	Q13526	163 aa	Predicted RBP	13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	STPG1	Q5TH74	334 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZCCHC12	Q6PEW1	402 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DTWD1	Q8N5C7	304 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR2I1P	Q8NGU4	316 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR2AJ1	Q8NGZ0	328 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DIO2	Q92813	273 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FEV	Q99581	238 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	LGR4	Q9BXB1	951 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	FGF22	Q9HCT0	170 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DMRT3	Q9NQL9	472 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PADI1	Q9ULC6	663 aa		13.56	□□□□□ -0.24
NEDD4L-238	ENST00000635997	IRGM	A1A4Y4	181 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SEC14L5	O43304	696 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NPPA	P01160	153 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PRDX1	Q06830	199 aa	Known RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KLHL22	Q53GT1	634 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SHQ1	Q6PI26	577 aa	Known RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HS3ST5	Q8IZT8	346 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR8K3	Q8NH51	312 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NETO1	Q8TDF5	533 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KCNE4	Q8WWG9	221 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NXPE2	Q96DL1	559 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CRB3	Q9BUF7	120 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	SLC6A16	Q9GZN6	736 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ARFGEF1	Q9Y6D6	1849 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GABRR3	A8MPY1	467 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	KCNJ13	O60928	360 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	TNFSF15	O95150	251 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OPN1LW	P04000	364 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ADORA3	P0DMS8	318 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	IMPA1	P29218	277 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GPR4	P46093	362 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CRYZ	Q08257	329 aa	Known RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RPE65	Q16518	533 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CTC1	Q2NKJ3	1217 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CCNJ	Q5T5M9	372 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	GALNT7	Q86SF2	657 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	MCAT	Q8IVS2	390 aa	Known RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	OR51L1	Q8NGJ5	315 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	PDXP	Q96GD0	296 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	LRFN3	Q9BTN0	628 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	WNK3	Q9BYP7	1800 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ZNF99	A8MXY4	864 aa	Predicted RBP	13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CLDN25	C9JDP6	229 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CCRL2	O00421	344 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	RNF13	O43567	381 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	CKMT1A	P12532	417 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	DRD2	P14416	443 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	ARNT	P27540	789 aa		13.55	□□□□□ -0.24
NEDD4L-238	ENST00000635997	HTR1E	P28566	365 aa		13.55	□□□□□ -0.24

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