RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 RGS5O15539 181 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PRODHO43272 600 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 MSL3P1P0C860 447 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 HIST1H1TP22492 207 aaPredicted RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 WNT4P56705 351 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 TPBGQ13641 420 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PLK5Q496M5 336 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 GLYR1Q49A26 553 aaPredicted RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ABHD17CQ6PCB6 329 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ADCK2Q7Z695 626 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 GNPDA2Q8TDQ7 276 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 C12orf66Q96MD2 445 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ASB16Q96NS5 453 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SARGQ9BW04 601 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 RAB11FIP5Q9BXF6 653 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PRDM7Q9NQW5 492 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 MBNL1Q9NR56 388 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 DPP7Q9UHL4 492 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 CES1P1Q9UKY3 287 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 A0A087WUU8 490 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PRR19A6NJB7 356 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PGRMC2O15173 223 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SEC14L5O43304 696 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PRICKLE3O43900 615 aaPredicted RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 GUCY1B2O75343 617 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PRKRAO75569 313 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 HMGN2P05204 90 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SERPIND1P05546 499 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 FHP07954 510 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 HTR3AP46098 478 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 RFX2P48378 723 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 OR2B6P58173 313 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SLAMF1Q13291 335 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 LASP1Q14847 261 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SNAPC1Q16533 368 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ATAT1Q5SQI0 421 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ZNF544Q6NX49 715 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 NRARPQ7Z6K4 114 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SMG7Q92540 1137 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 CNRIP1Q96F85 164 aaPredicted RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 TIMM29Q9BSF4 260 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PLA2G12AQ9BZM1 189 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 WDR26Q9H7D7 661 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 PLEKHB1Q9UF11 243 aaPredicted RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 SF3B6Q9Y3B4 125 aaKnown RBP12.01□□□□□ -0.49
LINC00540-203ENST00000631321 ATG4BQ9Y4P1 393 aa12.01□□□□□ -0.49
LINC00540-203ENST00000631321 TBC1D3BA6NDS4 549 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SNTNA6NMZ2 147 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 KDM4EB2RXH2 506 aaPredicted RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 CDRT1O95170 752 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 MYL12AP19105 171 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ATP5A1P25705 553 aaKnown RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 AHRP35869 848 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 IFNGR2P38484 337 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 BUD31P41223 144 aaPredicted RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 ABATP80404 500 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 DUSP2Q05923 314 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 TSPAN31Q12999 210 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 CEBPEQ15744 281 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 BAK1Q16611 211 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 MINDY4Q4G0A6 757 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ZMAT1Q5H9K5 638 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SLC27A4Q6P1M0 643 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 HSDL2Q6YN16 418 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 LAPTM4BQ86VI4 370 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 GJD3Q8N144 294 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ACOT4Q8N9L9 421 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SMARCD2Q92925 531 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 OTUB1Q96FW1 271 aaPredicted RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 ZNF486Q96H40 463 aaPredicted RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ANKRD19PQ9H560 264 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 XKR8Q9H6D3 395 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SLC6A20Q9NP91 592 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 EXOSC1Q9Y3B2 195 aaKnown RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 GLOD5A6NK44 160 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ERI3O43414 337 aaKnown RBP12□□□□□ -0.49
LINC00540-203ENST00000631321 CCNKO75909 580 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 UBXN7O94888 489 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 AIFM1O95831 613 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 NR2F6P10588 404 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 IL7P13232 177 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 ACP5P13686 325 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 F3P13726 295 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 PRKAG1P54619 331 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 PDGFRLQ15198 375 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 QSOX2Q6ZRP7 698 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 RASSF6Q6ZTQ3 369 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 OR6F1Q8NGZ6 308 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 OR8K5Q8NH50 307 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 TEX47Q8TBZ9 253 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 TM9SF4Q92544 642 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 DIO2Q92813 273 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 RNFT2Q96EX2 444 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 YIPF4Q9BSR8 244 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SAP130Q9H0E3 1048 aa12□□□□□ -0.49
LINC00540-203ENST00000631321 SLC38A1Q9H2H9 487 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms