RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ZNF407Q9C0G0 2248 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MPDZO75970 2070 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 A0A1B0GTL3 188 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SMIM31A0A1B0GVY4 71 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 TCRBV5S2A0A599 114 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 H7C0S8 307 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 UMODP07911 640 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 CHRM5P08912 532 aaPredicted RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SLC7A1P30825 629 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SLC6A9P48067 706 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PRLHRP49683 370 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 CDH13P55290 713 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 VSX2P58304 361 aaPredicted RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ATP6V0D1P61421 351 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 NAA20P61599 178 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 GRB7Q14451 532 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF169Q14929 603 aaPredicted RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SPATS1Q496A3 300 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MFSD4BQ5TF39 518 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 HMBOX1Q6NT76 420 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 RHBDD2Q6NTF9 364 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PAQR3Q6TCH7 311 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 Q6ZS92 163 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 C1orf122Q6ZSJ8 110 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SPATA24Q86W54 205 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SNX31Q8N9S9 440 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 FOXB1Q99853 325 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 OR52A5Q9H2C5 316 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MID1IP1Q9NPA3 183 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ARMC1Q9NVT9 282 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PTGDR2Q9Y5Y4 395 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 A0A0J9YVX5 310 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 A0A0J9YY10 115 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ATP6AP2A0A1C7CYW4 349 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 CCL21O00585 134 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 NME4O00746 187 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ZNHIT1O43257 154 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SGTAO43765 313 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 TMEM127O75204 238 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 GPC4O75487 556 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ATP6AP2O75787 350 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 KLHL18O94889 574 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 HSD17B1P14061 328 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 TCN1P20061 433 aaPredicted RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ATP6V1B2P21281 511 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SLC7A2P52569 658 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ADARP55265 1226 aaKnown RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 TXNL4AP83876 142 aaKnown RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PFKFB4Q16877 469 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 CTSL3PQ5NE16 218 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 THEMIS2Q5TEJ8 643 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 HLA-DQA1Q5Y7H0 255 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 STEAP3Q658P3 488 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PRMT9Q6P2P2 845 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 C3P1Q6ZMU1 363 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SNX20Q7Z614 316 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MRGPRGQ86SM5 289 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ANKFN1Q8N957 763 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ST6GALNAC3Q8NDV1 305 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 STAG3L4Q8TBR4 150 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ZUFSPQ96AP4 578 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MPP4Q96JB8 637 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 KCNA7Q96RP8 456 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 RBM38Q9H0Z9 239 aaKnown RBP4.54□□□□□ -1.68
LINC00550-201ENST00000629293 MVB12BQ9H7P6 319 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 SYTL2Q9HCH5 934 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 TAS2R13Q9NYV9 303 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ZNF225Q9UK10 706 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PCTPQ9UKL6 214 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 NDUFAF1Q9Y375 327 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 AP4S1Q9Y587 144 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 PRSS21Q9Y6M0 314 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ARID1AO14497 2285 aa4.54□□□□□ -1.68
LINC00550-201ENST00000629293 ASPDHA6ND91 283 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 IQCF5A8MTL0 148 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TXNDC9O14530 226 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OR1I1O60431 355 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 STATHP02808 62 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 TFAP2AP05549 437 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 LBPP18428 481 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 ENDOUP21128 410 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 MMP11P24347 488 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CXCR2P25025 360 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 EEF1DP29692 281 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 SHMT2P34897 504 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 STX1BP61266 288 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 PMP22Q01453 160 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 OCA2Q04671 838 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 EEF1A2Q05639 463 aaKnown RBP4.53□□□□□ -1.68
LINC00550-201ENST00000629293 MGAT2Q10469 447 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 GK3PQ14409 553 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 BCL7AQ4VC05 210 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 FAM209BQ5JX69 171 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 C6orf52Q5T4I8 152 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 LCN8Q6JVE9 175 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 C16orf54Q6UWD8 224 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 KIRREL2Q6UWL6 708 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 CARM1Q86X55 608 aa4.53□□□□□ -1.68
LINC00550-201ENST00000629293 BCORP1Q8N888 145 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms