RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 HLA-DQA1Q5Y7H0 255 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 OR52E8Q6IFG1 317 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 TMEM81Q6P7N7 255 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 RAPH1Q70E73 1250 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 C17orf47Q8NEP4 570 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 OR4K14Q8NGD5 310 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 OR52B6Q8NGF0 335 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 RHEBL1Q8TAI7 183 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 RDH11Q8TC12 318 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 FBF1Q8TES7 1133 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 CDKL2Q92772 493 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 PIGQQ9BRB3 760 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ERP44Q9BS26 406 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 MRPL1Q9BYD6 325 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 OR2B2Q9GZK3 357 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ANKRA2Q9H9E1 313 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 ZBTB26Q9HCK0 441 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 MAT2BQ9NZL9 334 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 C6orf203Q9P0P8 240 aaPredicted RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 WHRNQ9P202 907 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 TXNDC16Q9P2K2 825 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 FBXL2Q9UKC9 423 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 MAPRE3Q9UPY8 281 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 EXO1Q9UQ84 846 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 RAI1Q7Z5J4 1906 aaPredicted RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 SONP18583 2426 aaKnown RBP10.03□□□□□ -0.8
DDX41-218ENST00000625286 HIVEP2P31629 2446 aa10.03□□□□□ -0.8
DDX41-218ENST00000625286 DEFB108AA8MXU0 73 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 CCDC188H7C350 402 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 PPP6CO00743 305 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 EIF3HO15372 352 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDX41-218ENST00000625286 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 RAD51CO43502 376 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 ZIC3O60481 467 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 UGDHO60701 494 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 CYP4B1P13584 511 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 PORP16435 677 aaPredicted RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 NAGAP17050 411 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 NT5EP21589 574 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 PIK3R1P27986 724 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 FEN1P39748 380 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 LHX2P50458 406 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 ALDH18A1P54886 795 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 CLDN15P56746 228 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 CLDN18P56856 261 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 MAP4K2Q12851 820 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 SF3B4Q15427 424 aaKnown RBP eCLIP10.02□□□□□ -0.81
DDX41-218ENST00000625286 LTB4RQ15722 352 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 ZDHHC24Q6UX98 284 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 NUP54Q7Z3B4 507 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 TBC1D1Q86TI0 1168 aaPredicted RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 NUDT13Q86X67 352 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 PLD6Q8N2A8 252 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 ADCY4Q8NFM4 1077 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 OR7G1Q8NGA0 311 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 SMPDL3BQ92485 455 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 WNT2BQ93097 391 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 OMA1Q96E52 524 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 COX4I2Q96KJ9 171 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 MARK4Q96L34 752 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 WFIKKN1Q96NZ8 548 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 CENPKQ9BS16 269 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 SFXN3Q9BWM7 321 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 NOL11Q9H8H0 719 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 METTL7AQ9H8H3 244 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 ZNF395Q9H8N7 513 aaPredicted RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 FARSBQ9NSD9 589 aaKnown RBP10.02□□□□□ -0.81
DDX41-218ENST00000625286 ACOT9Q9Y305 439 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 TESMINQ9Y4I5 508 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 PCDHA9Q9Y5H5 950 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 SAR1BQ9Y6B6 198 aa10.02□□□□□ -0.81
DDX41-218ENST00000625286 H7C1Q1 480 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 ERN1O75460 977 aaKnown RBP10.01□□□□□ -0.81
DDX41-218ENST00000625286 CBR3O75828 277 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 GSTA2P09210 222 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 LOXP28300 417 aaPredicted RBP10.01□□□□□ -0.81
DDX41-218ENST00000625286 TMED10P49755 219 aaKnown RBP10.01□□□□□ -0.81
DDX41-218ENST00000625286 EMDP50402 254 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 NRG3P56975 720 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 B3GALT5-AS1P59052 145 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 GNG11P61952 73 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 HMGCS1Q01581 520 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 GALNT1Q10472 559 aaPredicted RBP10.01□□□□□ -0.81
DDX41-218ENST00000625286 RCAN2Q14206 197 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 Q5PR19 223 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 MROH9Q5TGP6 573 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 SHEQ5VZ18 495 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 OR5M10Q6IEU7 315 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 SLC30A6Q6NXT4 461 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 SLC48A1Q6P1K1 146 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
DDX41-218ENST00000625286 METTL4Q8N3J2 472 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
DDX41-218ENST00000625286 ISL2Q96A47 359 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms