RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 WDR20Q8TBZ3 569 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 KLHDC7BQ96G42 594 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 C16orf58Q96GQ5 468 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 ZDHHC5Q9C0B5 715 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 STARD5Q9NSY2 213 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 MRTO4Q9UKD2 239 aaKnown RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 NPIPA5A0A0B4J1W7 369 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 A8MV72 311 aaPredicted RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 NPIPA7E9PJI5 369 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 SLITRK5O94991 958 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 NPIPA8P0DM63 369 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 PVRP15151 417 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 TOMM20Q15388 145 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 KDM4DQ6B0I6 523 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 PODNL1Q6PEZ8 512 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 FAM83HQ6ZRV2 1179 aaPredicted RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 TECPR1Q7Z6L1 1165 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 MSRB3Q8IXL7 192 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 FANK1Q8TC84 345 aa12.54□□□□□ -0.4
SIRPA-204ENST00000622179 MMABQ96EY8 250 aaPredicted RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 MBNL1Q9NR56 388 aaKnown RBP12.54□□□□□ -0.4
SIRPA-204ENST00000622179 TMEM150CB9EJG8 249 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 OLFM2O95897 454 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 MLLT3P42568 568 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 CTBSQ01459 385 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 CCNJQ5T5M9 372 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 TMEM215Q68D42 235 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 FAM71E1Q6IPT2 247 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 ING3Q9NXR8 418 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 VNN3Q9NY84 501 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 C2orf92A0A1B0GVN3 265 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 ANKRD28O15084 1053 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 LDB3O75112 727 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 CPNE3O75131 537 aaKnown RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 SEC14L2O76054 403 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 RPP14O95059 124 aaKnown RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 ZNF791Q3KP31 576 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 DCDC5Q6ZRR9 648 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 PHOSPHO1Q8TCT1 267 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 TM4SF18Q96CE8 201 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 GAL3ST1Q99999 423 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 ACTRT3Q9BYD9 372 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 EPHX3Q9H6B9 360 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 RPRD1BQ9NQG5 326 aaKnown RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 CMAHPQ9Y471 501 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 GPC6Q9Y625 555 aaPredicted RBP12.53□□□□□ -0.4
SIRPA-204ENST00000622179 PMF1-BGLAPU3KQ54 211 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 GNSP15586 552 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 RCVRNP35243 200 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 NKX3-2P78367 333 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 NEIL3Q8TAT5 605 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 NDC1Q9BTX1 674 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 PRR14Q9BWN1 585 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 LGR4Q9BXB1 951 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 HCN3Q9P1Z3 774 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 NINQ8N4C6 2090 aa12.53□□□□□ -0.4
SIRPA-204ENST00000622179 MAP1BP46821 2468 aaKnown RBP12.52□□□□□ -0.4
SIRPA-204ENST00000622179 DHFRP00374 187 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 IL12BP29460 328 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 RGS6P49758 472 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 RAB30Q15771 203 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 BCL7AQ4VC05 210 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 C18orf63Q68DL7 685 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 FAAH2Q6GMR7 532 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 CCBE1Q6UXH8 406 aaPredicted RBP12.52□□□□□ -0.4
SIRPA-204ENST00000622179 VRK2Q86Y07 508 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 KLBQ86Z14 1044 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 PSD4Q8NDX1 1056 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 DPYSL5Q9BPU6 564 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SLC22A4Q9H015 551 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 ABCG4Q9H172 646 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SP140LQ9H930 580 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SMURF1Q9HCE7 757 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 TRIM36Q9NQ86 728 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SAGE1Q9NXZ1 904 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 SLC23A2Q9UGH3 650 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 KHNYNO15037 678 aaKnown RBP12.52□□□□□ -0.4
SIRPA-204ENST00000622179 COQ9O75208 318 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 GKN3PP0CG01 181 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 CD22P20273 847 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 TMEM240Q5SV17 173 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 LILRA6Q6PI73 481 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 ZNF517Q6ZMY9 492 aaPredicted RBP12.52□□□□□ -0.4
SIRPA-204ENST00000622179 RTL10Q7L3V2 364 aa12.52□□□□□ -0.4
SIRPA-204ENST00000622179 DNAJC22Q8N4W6 341 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms