RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MINDY4Q4G0A6 757 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 FLYWCH1Q4VC44 716 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 AGBL4Q5VU57 503 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF544Q6NX49 715 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 PAQR6Q6TCH4 344 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 RASSF6Q6ZTQ3 369 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 USP30Q70CQ3 517 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 BCDIN3DQ7Z5W3 292 aaKnown RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SFTPA1Q8IWL2 248 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 CELF2-AS1Q8N7Q2 184 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 MFSD9Q8NBP5 474 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SRFBP1Q8NEF9 429 aaKnown RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR2L5Q8NG80 312 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 PHOSPHO2Q8TCD6 241 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SMARCD2Q92925 531 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC25A46Q96AG3 418 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 KIAA1143Q96AT1 154 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZFYVE19Q96K21 471 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 C12orf66Q96MD2 445 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPA33Q99795 319 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SAP130Q9H0E3 1048 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 MIR1-1HGQ9H1L0 117 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 RSPH9Q9H1X1 276 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 KLHL31Q9H511 634 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRPV4Q9HBA0 871 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC6A20Q9NP91 592 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 MBNL1Q9NR56 388 aaKnown RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 PHPT1Q9NRX4 125 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 SNTG1Q9NSN8 517 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 LYARQ9NX58 379 aaKnown RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 CXXC1Q9P0U4 656 aaPredicted RBP9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 POU2F3Q9UKI9 436 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 LIPT1Q9Y234 373 aa9.05□□□□□ -0.96
IGHV3-54-201ENST00000622166 A0A087WUU8 490 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 A0A0G2JN53 185 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TBC1D3BA6NDS4 549 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 C4orf51C9J302 202 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 WWP2O00308 870 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 PGRMC2O15173 223 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 PPM1DO15297 605 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 CYP7B1O75881 506 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 CDRT1O95170 752 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 AIFM1O95831 613 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 HMGN2P05204 90 aaKnown RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRAPPC2P0DI81 140 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRAPPC2BP0DI82 140 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 NR2F6P10588 404 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 MAGP20916 626 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 HIST1H1TP22492 207 aaPredicted RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 FGF9P31371 208 aaPredicted RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 RPS5P46782 204 aaKnown RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC9A3P48764 834 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR2B6P58173 313 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 DUSP2Q05923 314 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ASAH1Q13510 395 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPR50Q13585 617 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ENPP2Q13822 863 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 IRF4Q15306 451 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF79Q15937 498 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SNAPC1Q16533 368 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 DECR1Q16698 335 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMEM240Q5SV17 173 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC48A1Q6P1K1 146 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TMEM53Q6P2H8 277 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 XKRXQ6PP77 449 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 CD200R1LQ6Q8B3 271 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 QSOX2Q6ZRP7 698 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SPATC1Q76KD6 591 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR8H2Q8N162 312 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ACOT4Q8N9L9 421 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF485Q8NCK3 441 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TEX47Q8TBZ9 253 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 GPR151Q8TDV0 419 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 DIO2Q92813 273 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 RNFT2Q96EX2 444 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 CNRIP1Q96F85 164 aaPredicted RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 LRR1Q96L50 414 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ZNF681Q96N22 645 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 OR7D2Q96RA2 312 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 NELL2Q99435 816 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 C17orf62Q9BQA9 187 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 PRRG3Q9BZD7 231 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 BTBD1Q9H0C5 482 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SLC38A1Q9H2H9 487 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 MIXL1Q9H2W2 232 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 XKR8Q9H6D3 395 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 WDR26Q9H7D7 661 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 SYNDIG1Q9H7V2 258 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 MRPS30Q9NP92 439 aaKnown RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ERVK13-1Q9NX77 482 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 NTMQ9P121 344 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 PLEKHB1Q9UF11 243 aaPredicted RBP9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ENTPD4Q9Y227 616 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 ATG4BQ9Y4P1 393 aa9.04□□□□□ -0.96
IGHV3-54-201ENST00000622166 TRDV1A0A1B0GX56 115 aa9.03□□□□□ -0.96
IGHV3-54-201ENST00000622166 FAM170BA6NMN3 283 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms