RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 ERP27Q96DN0 273 aa23.12■■□□□ 1.29
VEGFA-229ENST00000621747 C11orf24Q96F05 449 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-229ENST00000621747 OXSMQ9NWU1 459 aa23.12■■□□□ 1.29
VEGFA-229ENST00000621747 EHD3Q9NZN3 535 aa23.12■■□□□ 1.29
VEGFA-229ENST00000621747 SPRR3Q9UBC9 169 aa23.12■■□□□ 1.29
VEGFA-229ENST00000621747 ABCB1P08183 1280 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-229ENST00000621747 HOXD4P09016 255 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-229ENST00000621747 SOX18P35713 384 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 CASP3P42574 277 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 MRPS35P82673 323 aaKnown RBP23.11■■□□□ 1.29
VEGFA-229ENST00000621747 ZNF763Q0D2J5 394 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 PLCXD2Q0VAA5 305 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 LIPMQ5VYY2 423 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 BICRALQ6AI39 1079 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 C4orf33Q8N1A6 199 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 LILRB4Q8NHJ6 448 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 NEIL3Q8TAT5 605 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 SPOCK3Q9BQ16 436 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 SLC6A15Q9H2J7 730 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 METTL7AQ9H8H3 244 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 ANKZF1Q9H8Y5 726 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 SLC35C2Q9NQQ7 365 aa23.11■■□□□ 1.29
VEGFA-229ENST00000621747 UROSP10746 265 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 GABRA1P14867 456 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 ENDOUP21128 410 aaKnown RBP23.1■■□□□ 1.29
VEGFA-229ENST00000621747 DRD5P21918 477 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 KIR3DL1P43629 444 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 PPICP45877 212 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 EMDP50402 254 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 SLC18A2Q05940 514 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 ERCC6LQ2NKX8 1250 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 NUP54Q7Z3B4 507 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 TRIM46Q7Z4K8 759 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 SIMC1Q8NDZ2 872 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 OR10Q1Q8NGQ4 319 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 OMA1Q96E52 524 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 TMEM41AQ96HV5 264 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 TTYH2Q9BSA4 534 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 C12orf65Q9H3J6 166 aaKnown RBP23.1■■□□□ 1.29
VEGFA-229ENST00000621747 RRAGDQ9NQL2 400 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-229ENST00000621747 ALKBH4Q9NXW9 302 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 PCDHGB3Q9Y5G1 929 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 CENPEQ02224 2701 aa23.1■■□□□ 1.29
VEGFA-229ENST00000621747 ZNF407Q9C0G0 2248 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 TLDC2A0PJX2 215 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 FRG2CA6NGY1 282 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 DDCP20711 480 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 MPIP34949 423 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 TRPC1P48995 793 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 CEBPEQ15744 281 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 C1orf185Q5T7R7 199 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 TMEM81Q6P7N7 255 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 LURAP1LQ8IV03 231 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 CCDC71Q8IV32 467 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-229ENST00000621747 OR9A2Q8NGT5 310 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 CDC26Q8NHZ8 85 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 FAM76AQ8TAV0 307 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 IQCGQ9H095 443 aaKnown RBP23.09■■□□□ 1.29
VEGFA-229ENST00000621747 KCNJ16Q9NPI9 418 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 SENP1Q9P0U3 644 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 FAM215AQ9Y5M1 114 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 PCNX1Q96RV3 2341 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 ITPR2Q14571 2701 aa23.09■■□□□ 1.29
VEGFA-229ENST00000621747 FAM90A27PA6NNH2 459 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 FAM47E-STBD1D6RA91 191 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 TO15178 435 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 TRAPPC6AO75865 159 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 RSL1D1O76021 490 aaKnown RBP23.08■■□□□ 1.29
VEGFA-229ENST00000621747 GLI4P10075 376 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 ELAVL4P26378 380 aaKnown RBP23.08■■□□□ 1.29
VEGFA-229ENST00000621747 C2orf80Q0P641 193 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 FAM9CQ8IZT9 166 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 RIBC1Q8N443 379 aaPredicted RBP23.08■■□□□ 1.29
VEGFA-229ENST00000621747 KAT2AQ92830 837 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 HGDQ93099 445 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 BBS4Q96RK4 519 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 TRIM8Q9BZR9 551 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 ENKD1Q9H0I2 346 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 C15orf41Q9Y2V0 281 aa23.08■■□□□ 1.29
VEGFA-229ENST00000621747 WBP11Q9Y2W2 641 aaKnown RBP23.08■■□□□ 1.29
VEGFA-229ENST00000621747 C15orf38-AP3S2A0A0A6YYH1 394 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 CDK9P50750 372 aaKnown RBP23.07■■□□□ 1.28
VEGFA-229ENST00000621747 SNTA1Q13424 505 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 RTL6Q6ICC9 239 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 SLC30A6Q6NXT4 461 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 GNRHR2Q96P88 292 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 BTBD9Q96Q07 612 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 STMN4Q9H169 189 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-229ENST00000621747 UBQLN3Q9H347 655 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 MIEF1Q9NQG6 463 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 MKS1Q9NXB0 559 aa23.07■■□□□ 1.28
VEGFA-229ENST00000621747 GPR55Q9Y2T6 319 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-229ENST00000621747 POLR3HQ9Y535 204 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-229ENST00000621747 ENO4A6NNW6 628 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 HPNP05981 417 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 NUDT17P0C025 328 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 SSTR2P30874 369 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 PSPHP78330 225 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 FNDC7Q5VTL7 733 aa23.06■■□□□ 1.28
VEGFA-229ENST00000621747 TIGD3Q6B0B8 471 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms