RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 SOX8P57073 446 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 C6orf10Q5SRN2 563 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ANXA8L1Q5VT79 327 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 LINC00696Q6ZRV3 163 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 FITM2Q8N6M3 262 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 CCDC197Q8NCU1 140 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ADIPOR1Q96A54 375 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 VPS50Q96JG6 964 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 VSTM2LQ96N03 204 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 PAIP1Q9H074 479 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 NXF5Q9H1B4 397 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 FOLH1BQ9HBA9 442 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ANKRD10Q9NXR5 420 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 SLC25A37Q9NYZ2 338 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 MAP10Q9P2G4 905 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 CSAG2Q9Y5P2 127 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 NBASA2RRP1 2371 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 A0A087WV62 115 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 A0A1W2PP18 115 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 SYNDIG1LA6NDD5 238 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 RFXANKO14593 260 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 DYRK3O43781 588 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 CCDC22O60826 627 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 HMGN2P05204 90 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 SNRPB2P08579 225 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 ICAM2P13598 275 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 SOX11P35716 441 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 CD97P48960 835 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 TP53BP2Q13625 1128 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 LASP1Q14847 261 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 C6orf163Q5TEZ5 329 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 DESI1Q6ICB0 168 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ZNF621Q6ZSS3 439 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ZNF441Q8N8Z8 693 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 OR4N2Q8NGD1 307 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 GOT1L1Q8NHS2 421 aaPredicted RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 PNPT1Q8TCS8 783 aaKnown RBP12.63□□□□□ -0.39
NEK3-210ENST00000620675 TTC9Q92623 222 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 ERP27Q96DN0 273 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 IL1RL2Q9HB29 575 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 GPATCH2Q9NW75 528 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 PLA2G3Q9NZ20 509 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 NTMQ9P121 344 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 PCDHB14Q9Y5E9 798 aa12.63□□□□□ -0.39
NEK3-210ENST00000620675 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 EMC8O43402 210 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 PRAMEF2O60811 474 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 OR2J2O76002 312 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 ZFAND5O76080 213 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 PSG6Q00889 435 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 PCSK4Q6UW60 755 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 DLEU7Q6UYE1 221 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 RPS19BP1Q86WX3 136 aaKnown RBP12.62□□□□□ -0.39
NEK3-210ENST00000620675 PRR22Q8IZ63 422 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 C10orf111Q8N326 155 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 NATD1Q8N6N6 113 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 ANKS4BQ8N8V4 417 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 VPS37AQ8NEZ2 397 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 OR7G1Q8NGA0 311 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 ART5Q96L15 291 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 SLC39A3Q9BRY0 314 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 EPS8L2Q9H6S3 715 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 NEUROD4Q9HD90 331 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 MYOTQ9UBF9 498 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 KCNE3Q9Y6H6 103 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 RP1L1Q8IWN7 2480 aaPredicted RBP12.62□□□□□ -0.39
NEK3-210ENST00000620675 MED12Q93074 2177 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 NCKAP5O14513 1909 aa12.62□□□□□ -0.39
NEK3-210ENST00000620675 C2orf92A0A1B0GVN3 265 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ITGA10O75578 1167 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 NADKO95544 446 aaPredicted RBP12.61□□□□□ -0.39
NEK3-210ENST00000620675 CT45A8P0DMV1 189 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 CT45A9P0DMV2 189 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ACP2P11117 423 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 DDX5P17844 614 aaKnown RBP12.61□□□□□ -0.39
NEK3-210ENST00000620675 NR0B1P51843 470 aaKnown RBP12.61□□□□□ -0.39
NEK3-210ENST00000620675 MLF1P58340 268 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ZNF155Q12901 538 aaPredicted RBP12.61□□□□□ -0.39
NEK3-210ENST00000620675 SPDYE7PQ495Y7 208 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 CT45A2Q5DJT8 189 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ACER2Q5QJU3 275 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 COX20Q5RI15 118 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 MFSD12Q6NUT3 480 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 C6orf120Q7Z4R8 191 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 GALNT10Q86SR1 603 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 BEST3Q8N1M1 668 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 SLC16A11Q8NCK7 471 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 OR5D16Q8NGK9 328 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ABHD17AQ96GS6 310 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ITCHQ96J02 903 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 LRRC37BQ96QE4 947 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ARL8BQ9NVJ2 186 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 PCDHGB4Q9UN71 923 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms