RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PTGR1Q14914 329 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 EXOSC7Q15024 291 aaKnown RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 MAPKAPK3Q16644 382 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 GALNTL6Q49A17 601 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ATP6AP1LQ52LC2 224 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 KRTCAP3Q53RY4 240 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 OGFOD2Q6N063 350 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 TRIM42Q8IWZ5 723 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 FAM9CQ8IZT9 166 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 TAGAPQ8N103 731 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 FBXW8Q8N3Y1 598 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 CPSF7Q8N684 471 aaKnown RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 NATD1Q8N6N6 113 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ANKRD42Q8N9B4 389 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 OR2M7Q8NG81 312 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PPP1R14CQ8TAE6 165 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 HGDQ93099 445 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 HSPBAP1Q96EW2 488 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 LCORQ96JN0 433 aaPredicted RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 GPR137Q96N19 417 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 TSSK3Q96PN8 268 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ITPAQ9BY32 194 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 KRTAP3-2Q9BYR7 98 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 BRINP2Q9C0B6 783 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 NXF5Q9H1B4 397 aaKnown RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 MANSC1Q9H8J5 431 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ZDHHC11Q9H8X9 412 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 MIEF1Q9NQG6 463 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 KLHL1Q9NR64 748 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 GIMAP4Q9NUV9 329 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PNPOQ9NVS9 261 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ARGLU1Q9NWB6 273 aaPredicted RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 ZNF446Q9NWS9 450 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 CNIH4Q9P003 139 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 PRODH2Q9UF12 536 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 ZNF835Q9Y2P0 537 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 NPFFR2Q9Y5X5 522 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 HIVEP3Q5T1R4 2406 aa7.6□□□□□ -1.19
NEK3-209ENST00000618856 FLNBO75369 2602 aaKnown RBP7.6□□□□□ -1.19
NEK3-209ENST00000618856 PTPN13Q12923 2485 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 EXPH5Q8NEV8 1989 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 A0A0G2JMM0 328 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 A0A1W2PPB8 328 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 A0A1W2PRS3 328 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 FRG2CA6NGY1 282 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 KIR3DP1A8MWS1 328 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 HMGB1P1B2RPK0 211 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 SLCO1B7G3V0H7 640 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SDHDO14521 159 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 ADAM10O14672 748 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SCAMP2O15127 329 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 HDAC3O15379 428 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 TSPAN2O60636 221 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 TRIM3O75382 744 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 ABCB1P08183 1280 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 CCL3P10147 92 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 G6PDP11413 515 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 PRPS1L1P21108 318 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 RPL3P39023 403 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 MEOX1P50221 254 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 NR0B1P51843 470 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 NCBP2P52298 156 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEK3-209ENST00000618856 CLDN8P56748 225 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 PSG6Q00889 435 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 MAD2L1Q13257 205 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 RPS6KA2Q15349 733 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 CMPK2Q5EBM0 449 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 IL23RQ5VWK5 629 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SLC22A10Q63ZE4 541 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 ATG16L1Q676U5 607 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 ANKRD26P1Q6NSI1 321 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 NPSR1Q6W5P4 371 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 Q6ZPB1 254 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 RGS9BPQ6ZS82 235 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 MAVSQ7Z434 540 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 R3HCC1LQ7Z5L2 792 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 FGD2Q7Z6J4 655 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 LIX1Q8N485 282 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 FNDC5Q8NAU1 212 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 FAM98AQ8NCA5 519 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 OR10G3Q8NGC4 313 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SPPL2AQ8TCT8 520 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 ZNF75CPQ92670 426 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 KAT2AQ92830 837 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 RELTQ969Z4 430 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 CIDECQ96AQ7 238 aaPredicted RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 TUBGCP3Q96CW5 907 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 GIMAP5Q96F15 307 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SLC35A4Q96G79 324 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 C7orf26Q96N11 449 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 BBS4Q96RK4 519 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 GAL3ST4Q96RP7 486 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 FAM173AQ9BQD7 235 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 LMF2Q9BU23 707 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 ANGPTL4Q9BY76 406 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 ANKRA2Q9H9E1 313 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 SACM1LQ9NTJ5 587 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 NKIRAS1Q9NYS0 192 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms