RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 YIPF4Q9BSR8 244 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 PRR14Q9BWN1 585 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 SAP130Q9H0E3 1048 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 ZBP1Q9H171 429 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 GLIPR2Q9H4G4 154 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 ZCCHC3Q9NUD5 404 aaKnown RBP19.22■□□□□ 0.67
NEK3-208ENST00000618534 GSTK1Q9Y2Q3 226 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 COL4A3Q01955 1670 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 NDUFS4O43181 175 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 CHRM4P08173 479 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 HLA-DMAP28067 261 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 BUD31P41223 144 aaPredicted RBP19.22■□□□□ 0.67
NEK3-208ENST00000618534 MAP4K2Q12851 820 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 EFR3AQ14156 821 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 DUSP6Q16828 381 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 TRIQKQ629K1 86 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 Q8N402 240 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 HCAR2Q8TDS4 363 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 PPP1R3EQ9H7J1 279 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 B3GAT2Q9NPZ5 323 aa19.22■□□□□ 0.67
NEK3-208ENST00000618534 RPRD1BQ9NQG5 326 aaKnown RBP19.22■□□□□ 0.67
NEK3-208ENST00000618534 ACSS1Q9NUB1 689 aaPredicted RBP19.22■□□□□ 0.67
NEK3-208ENST00000618534 FAM25AB3EWG3 89 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 FAM25CB3EWG5 89 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 FAM25GB3EWG6 89 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 H7BY64 318 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 PPM1DO15297 605 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 NCR1O76036 304 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 LALBAP00709 142 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 PSKH1P11801 424 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 C6P13671 934 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 CPN2P22792 545 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 FUT5Q11128 374 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 MINDY4Q4G0A6 757 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 CNKSR3Q6P9H4 555 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 UBE3DQ7Z6J8 389 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 DCUN1D3Q8IWE4 304 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 LINC00471Q8N535 108 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 YIPF7Q8N8F6 280 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 C19orf18Q8NEA5 215 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 TEX47Q8TBZ9 253 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 PRAP1Q96NZ9 151 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 ARHGAP9Q9BRR9 750 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 PELI2Q9HAT8 420 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 ISYNA1Q9NPH2 558 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 ACOXLQ9NUZ1 547 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 EXOSC1Q9Y3B2 195 aaKnown RBP19.21■□□□□ 0.67
NEK3-208ENST00000618534 HCFC2Q9Y5Z7 792 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 ALG5Q9Y673 324 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 TCF20Q9UGU0 1960 aaKnown RBP19.21■□□□□ 0.67
NEK3-208ENST00000618534 RFXAPO00287 272 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 HCN1O60741 890 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 MOSPD3O75425 235 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 NTN1O95631 604 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 CCNYL3P0C7X3 344 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 FGF9P31371 208 aaPredicted RBP19.21■□□□□ 0.67
NEK3-208ENST00000618534 PRKAG1P54619 331 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 SLC27A4Q6P1M0 643 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 CD200R1LQ6Q8B3 271 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 LHFPL3Q86UP9 236 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 ANKK1Q8NFD2 765 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 JPH3Q8WXH2 748 aaPredicted RBP19.21■□□□□ 0.67
NEK3-208ENST00000618534 ZNF514Q96K75 400 aaPredicted RBP19.21■□□□□ 0.67
NEK3-208ENST00000618534 AMDHD1Q96NU7 426 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 QRFPRQ96P65 431 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 SOSTQ9BQB4 213 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 CLCA3PQ9Y6N3 262 aa19.21■□□□□ 0.67
NEK3-208ENST00000618534 A0A087WUU8 490 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 PRKRAO75569 313 aaKnown RBP19.2■□□□□ 0.66
NEK3-208ENST00000618534 UBXN7O94888 489 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 HLA-DQB1P01920 261 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 GSTM3P21266 225 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 ALAS2P22557 587 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 CHRNEQ04844 493 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 TCTE3Q8IZS6 198 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 TFGQ92734 400 aaPredicted RBP19.2■□□□□ 0.66
NEK3-208ENST00000618534 QRSL1Q9H0R6 528 aaKnown RBP19.2■□□□□ 0.66
NEK3-208ENST00000618534 IRGMA1A4Y4 181 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 NOTOA8MTQ0 251 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 CCR8P51685 355 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 REEP5Q00765 189 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 UBE3AQ05086 875 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 CAMK2BQ13554 666 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 FAM214AQ32MH5 1076 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 CLEC12AQ5QGZ9 265 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 TP53I13Q8NBR0 393 aaPredicted RBP19.2■□□□□ 0.66
NEK3-208ENST00000618534 ZNF485Q8NCK3 441 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 GRPEL2Q8TAA5 225 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 ARRDC3Q96B67 414 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 ATF6BQ99941 703 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 TMED9Q9BVK6 235 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 WASH6PQ9NQA3 447 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 GIMAP4Q9NUV9 329 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 RBFOX1Q9NWB1 397 aaKnown RBP19.2■□□□□ 0.66
NEK3-208ENST00000618534 CNIH4Q9P003 139 aa19.2■□□□□ 0.66
NEK3-208ENST00000618534 SHISA3A0PJX4 238 aa19.19■□□□□ 0.66
NEK3-208ENST00000618534 LZTS3O60299 673 aaPredicted RBP19.19■□□□□ 0.66
NEK3-208ENST00000618534 CPNE3O75131 537 aaKnown RBP19.19■□□□□ 0.66
NEK3-208ENST00000618534 ALPPL2P10696 532 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms