RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 COMMD6Q7Z4G1 85 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PLEKHH3Q7Z736 793 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KIAA0907Q7Z7F0 614 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR10H4Q8NGA5 316 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC5A11Q8WWX8 675 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 GCDHQ92947 438 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 PKMYT1Q99640 499 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 FXYD6Q9H0Q3 95 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC25A19Q9HC21 320 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 IFT46Q9NQC8 304 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ATPIF1Q9UII2 106 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 BTNL2Q9UIR0 455 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 HRH3Q9Y5N1 445 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CSNK1G3Q9Y6M4 447 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 BRCA1P38398 1863 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 NYNRINQ9P2P1 1898 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 TRIP12Q14669 1992 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR5K3A6NET4 321 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TMEM229AB2RXF0 380 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CA12O43570 354 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PIP5K1CO60331 668 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 NTN1O95631 604 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC16A8O95907 504 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 STATHP02808 62 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KLKB1P03952 638 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 C8GP07360 202 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 IL3P08700 152 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ELAVL4P26378 380 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 ERVK-21P61565 698 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 DSC1Q08554 894 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ZNF763Q0D2J5 394 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 OPCMLQ14982 345 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ARTNQ5T4W7 220 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TCTN3Q6NUS6 607 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 C11orf88Q6PI97 169 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 MSANTD1Q6ZTZ1 278 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SIAH3Q8IW03 269 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KRT78Q8N1N4 520 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 RPLP0P6Q8NHW5 317 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 MARC2Q969Z3 335 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TMEM175Q9BSA9 504 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC12A9Q9BXP2 914 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR51V1Q9H2C8 321 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KCNN2Q9H2S1 579 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ZDHHC6Q9H6R6 413 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ZDHHC3Q9NYG2 299 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 MGAT4CQ9UBM8 478 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 REV1Q9UBZ9 1251 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ZNF69Q9UC07 566 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 FBXL2Q9UKC9 423 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 DIMT1Q9UNQ2 313 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 COPS3Q9UNS2 423 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SHISA3A0PJX4 238 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 NPIPB15A6NHN6 443 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 TRIM77I1YAP6 450 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC9A3R1O14745 358 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 ARPC5O15511 151 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TFP02787 698 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CATP04040 527 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 EIF4EP06730 217 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 MRPL3P09001 348 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR12D1P0DN82 309 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PIPP12273 146 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 POU3F2P20265 443 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 MMP11P24347 488 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 GABRA5P31644 462 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PITPNBP48739 271 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 HNMTP50135 292 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TAS2R41P59536 307 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 PUDPQ08623 228 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CRHR2Q13324 411 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 GPR139Q6DWJ6 353 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 CDC73Q6P1J9 531 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 MED27Q6P2C8 311 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PGBD2Q6P3X8 592 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 C3P1Q6ZMU1 363 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 TRILQ7L0X0 811 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 LINGO2Q7L985 606 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ADCK2Q7Z695 626 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KLHL36Q8N4N3 616 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 HORMAD2Q8N7B1 307 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR5D16Q8NGK9 328 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 OR8D4Q8NGM9 314 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 SLC38A5Q8WUX1 472 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 KIAA1143Q96AT1 154 aaPredicted RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 TOE1Q96GM8 510 aaKnown RBP6.31□□□□□ -1.4
LMO3-235ENST00000616247 CXorf58Q96LI9 332 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 RBP7Q96R05 134 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 WFDC6Q9BQY6 131 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 GINS4Q9BRT9 223 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 ZFP64Q9NPA5 681 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 EQTNQ9NQ60 294 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 PCDHB16Q9NRJ7 776 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 C1GALT1Q9NS00 363 aa6.31□□□□□ -1.4
LMO3-235ENST00000616247 FBXW2Q9UKT8 454 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms