RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 EXOSC2Q13868 293 aaKnown RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 MPEG1Q2M385 716 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 GCDHQ92947 438 aaPredicted RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 IL17FQ96PD4 163 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 CXorf36Q9H7Y0 433 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 SLC25A19Q9HC21 320 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 TRPM5Q9NZQ8 1165 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 GULP1Q9UBP9 304 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 PCDHGA9Q9Y5G4 932 aaKnown RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 TSPAN6O43657 245 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 RGS11O94810 467 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 M6PRP20645 277 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 CD9P21926 228 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 PPP3R1P63098 170 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 ZNF763Q0D2J5 394 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 TXNDC8Q6A555 127 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 REEP3Q6NUK4 255 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 C19orf48Q6RUI8 117 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 HSDL2Q6YN16 418 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 OR11H7Q8NGC8 314 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 UBTD2Q8WUN7 234 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 DNAJA4Q8WW22 397 aaPredicted RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 ZNF582Q96NG8 517 aaPredicted RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 WDFY2Q96P53 400 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 GPA33Q99795 319 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 THAP7Q9BT49 309 aaPredicted RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 TMEM43Q9BTV4 400 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
MSH6-214ENST00000616033 CHST8Q9H2A9 424 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 CSNK1G3Q9Y6M4 447 aa12.45□□□□□ -0.42
MSH6-214ENST00000616033 SLC9A3R1O14745 358 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 C8GP07360 202 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 NR2F1P10589 423 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 ATP1B2P14415 290 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 DNASE1P24855 282 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 STOMP27105 288 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SERPINA4P29622 427 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SLC6A12P48065 614 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 CLDN20P56880 219 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 OR10A3P58181 314 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 RGS1Q08116 209 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 TNK1Q13470 666 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 PGBD2Q6P3X8 592 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 MRPL10Q7Z7H8 261 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 RTN4RL1Q86UN2 441 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 OR51G2Q8NGK0 314 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 ST8SIA4Q92187 359 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SPNS1Q9H2V7 528 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GHITMQ9H3K2 345 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 MTG2Q9H4K7 406 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 EQTNQ9NQ60 294 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 NANSQ9NR45 359 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 ENOPH1Q9UHY7 261 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 TEX13CA0A0J9YWL9 993 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 TOR1AO14656 332 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 CHP2O43745 196 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 MMP11P24347 488 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GIPRP48546 466 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 AP2S1P53680 142 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 RPS7P62081 194 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 ZNF628Q5EBL2 1059 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 RETSATQ6NUM9 610 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 ARL9Q6T311 187 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 TMPRSS9Q7Z410 1059 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 OXR1Q8N573 874 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 OR2T35Q8NGX2 323 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 WDR20Q8TBZ3 569 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 AP2M1Q96CW1 435 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SMG9Q9H0W8 520 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 IMP3Q9NV31 184 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 OR6C2Q9NZP2 312 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GMEB2Q9UKD1 530 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GABRPO00591 440 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 FZD6O60353 706 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 KDM4BO94953 1096 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 CBX5P45973 191 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 MTNR1AP48039 350 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 EVX1P49640 407 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SLC3A1Q07837 685 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 ADAM15Q13444 863 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 PLK5Q496M5 336 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 MED27Q6P2C8 311 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GDPGP1Q6ZNW5 385 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 RASSF6Q6ZTQ3 369 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 UCN3Q969E3 161 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 MSLNLQ96KJ4 702 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 SECISBP2Q96T21 854 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 RC3H2Q9HBD1 1191 aaKnown RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
MSH6-214ENST00000616033 STOX2Q9P2F5 926 aaPredicted RBP12.44□□□□□ -0.42
MSH6-214ENST00000616033 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms