RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 ERP27Q96DN0 273 aa23.12■■□□□ 1.29
VEGFA-227ENST00000615393 C11orf24Q96F05 449 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-227ENST00000615393 OXSMQ9NWU1 459 aa23.12■■□□□ 1.29
VEGFA-227ENST00000615393 EHD3Q9NZN3 535 aa23.12■■□□□ 1.29
VEGFA-227ENST00000615393 SPRR3Q9UBC9 169 aa23.12■■□□□ 1.29
VEGFA-227ENST00000615393 ABCB1P08183 1280 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-227ENST00000615393 HOXD4P09016 255 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-227ENST00000615393 SOX18P35713 384 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 CASP3P42574 277 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 MRPS35P82673 323 aaKnown RBP23.11■■□□□ 1.29
VEGFA-227ENST00000615393 ZNF763Q0D2J5 394 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 PLCXD2Q0VAA5 305 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 LIPMQ5VYY2 423 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 BICRALQ6AI39 1079 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 C4orf33Q8N1A6 199 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 LILRB4Q8NHJ6 448 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 NEIL3Q8TAT5 605 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 SPOCK3Q9BQ16 436 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 SLC6A15Q9H2J7 730 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 METTL7AQ9H8H3 244 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 ANKZF1Q9H8Y5 726 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 SLC35C2Q9NQQ7 365 aa23.11■■□□□ 1.29
VEGFA-227ENST00000615393 UROSP10746 265 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 GABRA1P14867 456 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 ENDOUP21128 410 aaKnown RBP23.1■■□□□ 1.29
VEGFA-227ENST00000615393 DRD5P21918 477 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 KIR3DL1P43629 444 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 PPICP45877 212 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 EMDP50402 254 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 SLC18A2Q05940 514 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 ERCC6LQ2NKX8 1250 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 NUP54Q7Z3B4 507 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 TRIM46Q7Z4K8 759 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 SIMC1Q8NDZ2 872 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 OR10Q1Q8NGQ4 319 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 OMA1Q96E52 524 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 TMEM41AQ96HV5 264 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 TTYH2Q9BSA4 534 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 C12orf65Q9H3J6 166 aaKnown RBP23.1■■□□□ 1.29
VEGFA-227ENST00000615393 RRAGDQ9NQL2 400 aaPredicted RBP23.1■■□□□ 1.29
VEGFA-227ENST00000615393 ALKBH4Q9NXW9 302 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 PCDHGB3Q9Y5G1 929 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 CENPEQ02224 2701 aa23.1■■□□□ 1.29
VEGFA-227ENST00000615393 ZNF407Q9C0G0 2248 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 TLDC2A0PJX2 215 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 FRG2CA6NGY1 282 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 DDCP20711 480 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 MPIP34949 423 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 TRPC1P48995 793 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 CEBPEQ15744 281 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 C1orf185Q5T7R7 199 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 TMEM81Q6P7N7 255 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 LURAP1LQ8IV03 231 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 CCDC71Q8IV32 467 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-227ENST00000615393 OR9A2Q8NGT5 310 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 CDC26Q8NHZ8 85 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 FAM76AQ8TAV0 307 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 IQCGQ9H095 443 aaKnown RBP23.09■■□□□ 1.29
VEGFA-227ENST00000615393 KCNJ16Q9NPI9 418 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 SENP1Q9P0U3 644 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 FAM215AQ9Y5M1 114 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 PCNX1Q96RV3 2341 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 ITPR2Q14571 2701 aa23.09■■□□□ 1.29
VEGFA-227ENST00000615393 FAM90A27PA6NNH2 459 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 FAM47E-STBD1D6RA91 191 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 TO15178 435 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 TRAPPC6AO75865 159 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 RSL1D1O76021 490 aaKnown RBP23.08■■□□□ 1.29
VEGFA-227ENST00000615393 GLI4P10075 376 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 ELAVL4P26378 380 aaKnown RBP23.08■■□□□ 1.29
VEGFA-227ENST00000615393 C2orf80Q0P641 193 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 FAM9CQ8IZT9 166 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 RIBC1Q8N443 379 aaPredicted RBP23.08■■□□□ 1.29
VEGFA-227ENST00000615393 KAT2AQ92830 837 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 HGDQ93099 445 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 BBS4Q96RK4 519 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 TRIM8Q9BZR9 551 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 ENKD1Q9H0I2 346 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 C15orf41Q9Y2V0 281 aa23.08■■□□□ 1.29
VEGFA-227ENST00000615393 WBP11Q9Y2W2 641 aaKnown RBP23.08■■□□□ 1.29
VEGFA-227ENST00000615393 C15orf38-AP3S2A0A0A6YYH1 394 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 CDK9P50750 372 aaKnown RBP23.07■■□□□ 1.28
VEGFA-227ENST00000615393 SNTA1Q13424 505 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 RTL6Q6ICC9 239 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 SLC30A6Q6NXT4 461 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 GNRHR2Q96P88 292 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 BTBD9Q96Q07 612 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 STMN4Q9H169 189 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-227ENST00000615393 UBQLN3Q9H347 655 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 MIEF1Q9NQG6 463 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 MKS1Q9NXB0 559 aa23.07■■□□□ 1.28
VEGFA-227ENST00000615393 GPR55Q9Y2T6 319 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-227ENST00000615393 POLR3HQ9Y535 204 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-227ENST00000615393 ENO4A6NNW6 628 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 HPNP05981 417 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 NUDT17P0C025 328 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 SSTR2P30874 369 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 PSPHP78330 225 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 FNDC7Q5VTL7 733 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 TIGD3Q6B0B8 471 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms