RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 THBS2P35442 1172 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NUDT1P36639 197 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ALDH3B2P48448 385 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MAN2A2P49641 1150 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAB8AP61006 207 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NKAPLQ5M9Q1 402 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SLC35F1Q5T1Q4 408 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SHFQ7M4L6 423 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 FAM46AQ96IP4 442 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 LRR1Q96L50 414 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KLHL15Q96M94 604 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF285Q96NJ3 590 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 C7orf50Q9BRJ6 194 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.35□□□□□ -1.718e-8■■■■□ 20.2
CHD9-221ENST00000615216 MTHFD2LQ9H903 347 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 KLHL9Q9P2J3 617 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RNF215Q9Y6U7 377 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CD8B2A6NJW9 211 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 A8MU76 341 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PLD2O14939 933 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PRAF2O60831 178 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 F7P08709 466 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 CD8BP10966 210 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MTNR1AP48039 350 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KCNJ5P48544 419 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 DIO3P55073 304 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 TRA2BP62995 288 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 TCTE1Q5JU00 501 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SERPINA11Q86U17 422 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF619Q8N2I2 560 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 TEX26Q8N6G2 289 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MFSD8Q8NHS3 518 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SNAPC3Q92966 411 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ECHDC3Q96DC8 303 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 LGALS12Q96DT0 336 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 HYLS1Q96M11 299 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR5B12Q96R08 314 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF395Q9H8N7 513 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 KCNIP1Q9NZI2 227 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KLHL13Q9P2N7 655 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SPO11Q9Y5K1 396 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ST14Q9Y5Y6 855 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 AHDC1Q5TGY3 1603 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 A0A1W2PPW3 197 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MEGF11A6BM72 1044 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF840PA6NDX5 716 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RFPL2O75678 378 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ZNF43P17038 809 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CD34P28906 385 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SPINT3P49223 89 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 GK2Q14410 553 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 SPATC1Q76KD6 591 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PHC2Q8IXK0 858 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SLC35F2Q8IXU6 374 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CCDC116Q8IYX3 515 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CHDHQ8NE62 594 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 CASTOR1Q8WTX7 329 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 AUTS2Q8WXX7 1259 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 TANKQ92844 425 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SLC41A3Q96GZ6 507 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 NSUN5Q96P11 429 aaKnown RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAD9AQ99638 391 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 TXLNGYQ9BZA5 131 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CLEC4EQ9ULY5 219 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SNAI1O95863 264 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 RHOP08100 348 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OSMP13725 252 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 IRF2P14316 349 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 FOSL2P15408 326 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CHMP24386 653 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ARL3P36405 182 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 DLSTP36957 453 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 RAB28P51157 221 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR4D2P58180 307 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 GALK2Q01415 458 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 ARHGAP19Q14CB8 494 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 AAK1Q2M2I8 961 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 UBE2NLQ5JXB2 153 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MPP7Q5T2T1 576 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KIAA0895LQ68EN5 471 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MAMDC4Q6UXC1 1216 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SYNPOQ8N3V7 929 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 DNAJC22Q8N4W6 341 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR10Q1Q8NGQ4 319 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 MGLLQ99685 303 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 HDHD5Q9BXW7 423 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 CUEDC1Q9NWM3 386 aaPredicted RBP4.35□□□□□ -1.71
CHD9-221ENST00000615216 NAALAD2Q9Y3Q0 740 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PCDHA9Q9Y5H5 950 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 EFCAB7A8K855 629 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 KDELR2P33947 212 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SERTAD2Q14140 314 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SF3B4Q15427 424 aaKnown RBP eCLIP4.35□□□□□ -1.713e-6■■■■□ 23.3
CHD9-221ENST00000615216 TREML1Q86YW5 311 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 PLXDC1Q8IUK5 500 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 SYT14Q8NB59 555 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 GALNT11Q8NCW6 608 aa4.35□□□□□ -1.71
CHD9-221ENST00000615216 OR5AK2Q8NH90 309 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms