RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 WDR20Q8TBZ3 569 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SETD7Q8WTS6 366 aaKnown RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 RSC1A1Q92681 617 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SLC38A3Q99624 504 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SGPP1Q9BX95 441 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SEMA3GQ9NS98 782 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 VNN3Q9NY84 501 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SLC17A4Q9Y2C5 497 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 OR10H1Q9Y4A9 318 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PLXNA2O75051 1894 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PRR14LQ5THK1 2151 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 AQP12BA6NM10 295 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PCDH17O14917 1159 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ANKRD28O15084 1053 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 TMPRSS11DO60235 418 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ABCB7O75027 752 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 MTRF1O75570 445 aaKnown RBP9.28□□□□□ -0.92
CTCFL-222ENST00000609232 HSD17B2P37059 387 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 RAB28P51157 221 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ARSFP54793 590 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CDK6Q00534 326 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 INAVAQ3KP66 663 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CYBRD1Q53TN4 286 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 COQ5Q5HYK3 327 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ATG9BQ674R7 924 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SPATC1Q76KD6 591 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PAGE2Q7Z2X7 111 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 AQP12AQ8IXF9 295 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 OXR1Q8N573 874 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ANKRD53Q8N9V6 530 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 PIK3R3Q92569 461 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 BMFQ96LC9 184 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CLMPQ9H6B4 373 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 ADPRHL2Q9NX46 363 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 AHSPQ9NZD4 102 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 CNIH4Q9P003 139 aa9.28□□□□□ -0.92
CTCFL-222ENST00000609232 A0A1B0GVC2 190 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 A0A1W2PRQ8 180 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 A6NIN4 97 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 MEN1O00255 615 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 KDELR2P33947 212 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 HNRNPFP52597 415 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 VBP1P61758 197 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 ATP6AP1Q15904 470 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 RPE65Q16518 533 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 MLIPQ5VWP3 458 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 THAP5Q7Z6K1 395 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 ARMC8Q8IUR7 673 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 LNX2Q8N448 690 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 STX19Q8N4C7 294 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 LINC01555Q8NAE3 123 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 C16orf78Q8WTQ4 265 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 RPL3LQ92901 407 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 DEPDC7Q96QD5 511 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 YTHDF1Q9BYJ9 559 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 PNO1Q9NRX1 252 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 AGPAT4Q9NRZ5 378 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 THUMPD1Q9NXG2 353 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 CD300AQ9UGN4 299 aa9.27□□□□□ -0.92
CTCFL-222ENST00000609232 MRPS17Q9Y2R5 130 aaKnown RBP9.27□□□□□ -0.92
CTCFL-222ENST00000609232 FAM183AA6NL82 134 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 TNFRSF10AO00220 468 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 BCKDKO14874 412 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 DOK2O60496 412 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ICMTO60725 284 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ANGPTL1O95841 491 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 C7P10643 843 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 NOS3P29474 1203 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 SRP54P61011 504 aaKnown RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 TUBA3CQ13748 450 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 SPIN4Q56A73 249 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 TRIM40Q6P9F5 258 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ARL6IP6Q8N6S5 226 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 TTC29Q8NA56 475 aaPredicted RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 OR9A4Q8NGU2 314 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 OR51A7Q8NH64 312 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 CDX2Q99626 313 aaPredicted RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 CHCHD6Q9BRQ6 235 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 PCBD2Q9H0N5 130 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 OR51V1Q9H2C8 321 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 CACYBPQ9HB71 228 aaKnown RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 DMRT3Q9NQL9 472 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 USE1Q9NZ43 259 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ZNF106Q9H2Y7 1883 aaKnown RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 IGHV3-20A0A0C4DH32 117 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 PLPP1O14494 284 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 RDH16O75452 317 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 CCNKO75909 580 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 FABP3P05413 133 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ITPKBP27987 946 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 TIA1P31483 386 aaKnown RBP eCLIP9.27□□□□□ -0.934e-7■■■■□ 23.2
CTCFL-222ENST00000609232 ASMTP46597 345 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ZFP36L2P47974 494 aaKnown RBP9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ZNF763Q0D2J5 394 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 DMRTC1Q5HYR2 192 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 LCTLQ6UWM7 567 aa9.27□□□□□ -0.93
CTCFL-222ENST00000609232 ADHFE1Q8IWW8 467 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms