RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.77□□□□□ -1.81
SH3D19-213ENST00000604922 RNLSQ5VYX0 342 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 PLPP4Q5VZY2 271 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 TCEAL6Q6IPX3 200 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 SERINC5Q86VE9 423 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 CARM1Q86X55 608 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 APCDD1Q8J025 514 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 AGAP11Q8TF27 550 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 RAD54LQ92698 747 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 CLDN23Q96B33 292 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 DPEP2Q9H4A9 486 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 CYP39A1Q9NYL5 469 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 MTF2Q9Y483 593 aaPredicted RBP3.77□□□□□ -1.81
SH3D19-213ENST00000604922 CACNA1DQ01668 2161 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 PI4KAP42356 2102 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 FLNCQ14315 2725 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 ITPR2Q14571 2701 aa3.77□□□□□ -1.81
SH3D19-213ENST00000604922 A0A1W2PNU3 283 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 PRSS46E5RG02 174 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 E9PAM4 449 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 F5H6K3 240 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 ZNF354AO60765 605 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 N4BP1O75113 896 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 MOCS2O96007 188 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 MT-ND1P03886 318 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 EEF2P13639 858 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 FDPSP14324 419 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 KRT20P35900 424 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 RPL34P49207 117 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 RNF212Q495C1 297 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 RPUSD3Q6P087 351 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 Q71RC1 249 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 DNAJB7Q7Z6W7 309 aaPredicted RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 NCOA7Q8NI08 942 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 CNDP2Q96KP4 475 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 UBQLN3Q9H347 655 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 MARCH7Q9H992 704 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 WDR41Q9HAD4 459 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 VSIG4Q9Y279 399 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 FBN3Q75N90 2809 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 LAMA4Q16363 1823 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 PTPRBP23467 1997 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 EML5Q05BV3 1969 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 BOD1L1Q8NFC6 3051 aa3.76□□□□□ -1.81
SH3D19-213ENST00000604922 MTCL1Q9Y4B5 1905 aaKnown RBP3.76□□□□□ -1.81
SH3D19-213ENST00000604922 KNTC1P50748 2209 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 LRRK2Q5S007 2527 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 A0A1B0GTH9 108 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 FLRT2O43155 660 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 DNTTP04053 509 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 CASTP20810 708 aaKnown RBP3.75□□□□□ -1.81
SH3D19-213ENST00000604922 ELK3P41970 407 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 RPS9P46781 194 aaKnown RBP3.75□□□□□ -1.81
SH3D19-213ENST00000604922 RAD23AP54725 363 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 KNOP1Q1ED39 458 aaKnown RBP3.75□□□□□ -1.81
SH3D19-213ENST00000604922 EMBQ6PCB8 327 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 C16orf54Q6UWD8 224 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 BTNL8Q6UX41 500 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 LSMEM1Q8N8F7 131 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 KIF18AQ8NI77 898 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 ZNF414Q96IQ9 312 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 SERAC1Q96JX3 654 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 ST6GALNAC4Q9H4F1 302 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 PDRG1Q9NUG6 133 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 EPS15L1Q9UBC2 864 aa3.75□□□□□ -1.81
SH3D19-213ENST00000604922 SETD2Q9BYW2 2564 aaPredicted RBP3.75□□□□□ -1.81
SH3D19-213ENST00000604922 USP9YO00507 2555 aaPredicted RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 LRBAP50851 2863 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 SPTBN1Q01082 2364 aaKnown RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 IGHV3-16A0A0C4DH30 117 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 RPL37AP8A6NKH3 93 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 ANHXE9PGG2 379 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 K7EQG2 157 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 NDUFB10O96000 172 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 RENP00797 406 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 PDGFRAP16234 1089 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 CSRP1P21291 193 aaKnown RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 SLC1A4P43007 532 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 GSK3BP49841 420 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 KLRC3Q07444 240 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 ARHGAP1Q07960 439 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 MAPK11Q15759 364 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 LBHQ53QV2 105 aaPredicted RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 SPATA21Q7Z572 469 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 LRRC49Q8IUZ0 686 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 THNSL1Q8IYQ7 743 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 NME8Q8N427 588 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 MRPL43Q8N983 215 aaKnown RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 COLGALT1Q8NBJ5 622 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 OR4Q3Q8NH05 313 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 HEXDCQ8WVB3 486 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 ATP6V0A1Q93050 837 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 CNOT6LQ96LI5 555 aaKnown RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 TSSK2Q96PF2 358 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 ALKBH3Q96Q83 286 aaPredicted RBP3.74□□□□□ -1.81
SH3D19-213ENST00000604922 PCNX1Q96RV3 2341 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 FERMT1Q9BQL6 677 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 FAM129AQ9BZQ8 928 aa3.74□□□□□ -1.81
SH3D19-213ENST00000604922 SWAP70Q9UH65 585 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms