RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCDHGA8Q9Y5G5 932 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TTC28Q96AY4 2481 aa11.49□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 A0A1W2PS29 197 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM227AF5H4B4 570 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DYRK3O43781 588 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRAMEF2O60811 474 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DNAJB5O75953 348 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ALOX5P09917 674 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MYF5P13349 255 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF23P17027 643 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CD247P20963 164 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FPR1P21462 350 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DNAJA1P31689 397 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KCNJ5P48544 419 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ALDH3A2P51648 485 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRKAG1P54619 331 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RPS26P62854 115 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HPCAP84074 193 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FUT5Q11128 374 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FUT7Q11130 342 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZSWIM7Q19AV6 140 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LRRC36Q1X8D7 754 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SWT1Q5T5J6 900 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SHQ1Q6PI26 577 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C16orf62Q7Z3J2 963 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 AGBL5Q8NDL9 886 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PLPP5Q8NEB5 264 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM110BQ8TC76 370 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 XAGE5Q8WWM1 108 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KAT2AQ92830 837 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RIT1Q92963 219 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMBIM1Q969X1 311 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 COL26A1Q96A83 441 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 VPS50Q96JG6 964 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ART5Q96L15 291 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF354BQ96LW1 612 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LRFN5Q96NI6 719 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RBM4BQ9BQ04 359 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RBM4Q9BWF3 364 aaKnown RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PINK1Q9BXM7 581 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM121BQ9BXQ6 578 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ALOXE3Q9BYJ1 711 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SAP130Q9H0E3 1048 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 COQ10BQ9H8M1 238 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ATXN7L1Q9ULK2 861 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CFL2Q9Y281 166 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IFT52Q9Y366 437 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TMEM184BQ9Y519 407 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 V9GYQ6 96 aa11.48□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRAMEF27A3QJZ7 478 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ARRDC5A6NEK1 342 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 A8MU76 341 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 GNGT2O14610 69 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NKX2-2O95096 273 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CBX7O95931 251 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ALBP02768 609 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IFNW1P05000 195 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 THBS1P07996 1170 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CDK4P11802 303 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RHCEP18577 417 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 S1PR1P21453 382 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 AQP1P29972 269 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRKAR1BP31321 381 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 VLDLRP98155 873 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 E2F1Q01094 437 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MED21Q13503 144 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DAG1Q14118 895 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNHIT3Q15649 155 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SYPL1Q16563 259 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DHRS4L2Q6PKH6 230 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 VTCN1Q7Z7D3 282 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PPP1R3BQ86XI6 285 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR4N5Q8IXE1 308 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MARVELD2Q8N4S9 558 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SUMF1Q8NBK3 374 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR5D16Q8NGK9 328 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR2I1PQ8NGU4 316 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PROX1Q92786 737 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RAB8BQ92930 207 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TPD52L3Q96J77 140 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF300Q96RE9 604 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CDC6Q99741 560 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF350Q9GZX5 532 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 IRF2BPLQ9H1B7 796 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC26A1Q9H2B4 701 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC38A1Q9H2H9 487 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MTHFD2LQ9H903 347 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CACYBPQ9HB71 228 aaKnown RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ADAP2Q9NPF8 381 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C11orf16Q9NQ32 467 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FBXO8Q9NRD0 319 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SMPD3Q9NY59 655 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SEC14L3Q9UDX4 400 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PRODH2Q9UF12 536 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 KCND3Q9UK17 655 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms