RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ANKRA2Q9H9E1 313 aa19.05■□□□□ 0.64
SHKBP1-225ENST00000600733 PRSS16Q9NQE7 514 aa19.05■□□□□ 0.64
SHKBP1-225ENST00000600733 IMP3Q9NV31 184 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-225ENST00000600733 CMAHPQ9Y471 501 aa19.05■□□□□ 0.64
SHKBP1-225ENST00000600733 TBC1D3BA6NDS4 549 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 C1QTNF3-AMACRE9PGA6 284 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 FRS3O43559 492 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 CLEC3AO75596 197 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 PCDH8O95206 1070 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 MSL3P1P0C860 447 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 NTSP30990 170 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 BCL6P41182 706 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 HTR3AP46098 478 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 TAS2R38P59533 333 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 IFITM2Q01629 132 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 PRDX1Q06830 199 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 HNRNPA0Q13151 305 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 TAB1Q15750 504 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 GPAT3Q53EU6 434 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 ARMC4Q5T2S8 1044 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 BBS10Q8TAM1 723 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 TM9SF4Q92544 642 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 PITHD1Q9GZP4 211 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SRRQ9GZT4 340 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 MARCH7Q9H992 704 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 NEK6Q9HC98 313 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 ABCB9Q9NP78 766 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 ATG4BQ9Y4P1 393 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 IQCMA0A1B0GVH7 501 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 IL7P13232 177 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 CPEP16870 476 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 GAS1P54826 345 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 MAP4K2Q12851 820 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SLAMF1Q13291 335 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 NDUFA9Q16795 377 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 FAM78AQ5JUQ0 283 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SLC25A30Q5SVS4 291 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 TMEM107Q6UX40 140 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SHFQ7M4L6 423 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 UBQLNLQ8IYU4 475 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SUN3Q8TAQ9 357 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 SLC9A6Q92581 669 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 CNRIP1Q96F85 164 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 ZNF486Q96H40 463 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 WDFY2Q96P53 400 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 HDAC8Q9BY41 377 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 BCL2L10Q9HD36 194 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 IL23AQ9NPF7 189 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 ZSCAN32Q9NX65 697 aa19.04■□□□□ 0.64
SHKBP1-225ENST00000600733 A0A087WUU8 490 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 A0A1W2PQ09 198 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 A0A1W2PR48 441 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 ERI3O43414 337 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 NFATC1O95644 943 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 DRD3P35462 400 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SMSP52788 366 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 TRA2BP62995 288 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 GPR50Q13585 617 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SLC9A5Q14940 896 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 ENTPD8Q5MY95 495 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 KIAA1161Q6NSJ0 714 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 LSRQ86X29 649 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 GATAD2BQ8WXI9 593 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 ZG16BQ96DA0 208 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 TRMT61BQ9BVS5 477 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 RFXAPO00287 272 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 MYL12AP19105 171 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 RPS25P62851 125 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 MLLT1Q03111 559 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 MADCAM1Q13477 382 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SYT14Q8NB59 555 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 OR8D4Q8NGM9 314 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 OR6F1Q8NGZ6 308 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SETD6Q8TBK2 473 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 KLK6Q92876 244 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 RNFT2Q96EX2 444 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SPATA5L1Q9BVQ7 753 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 FAIM2Q9BWQ8 316 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 MIXL1Q9H2W2 232 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 EQTNQ9NQ60 294 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 CNIH4Q9P003 139 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 KCNK6Q9Y257 313 aa19.03■□□□□ 0.64
SHKBP1-225ENST00000600733 SLC35F4A4IF30 521 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 TSPAN19P0C672 248 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 ACADMP11310 421 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 SDC2P34741 201 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 WNT4P56705 351 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 HYAL2Q12891 473 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 CLEC12AQ5QGZ9 265 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 C18orf63Q68DL7 685 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 FAM131AQ6UXB0 335 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 ZNF517Q6ZMY9 492 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 RAB7BQ96AH8 199 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 TM9SF2Q99805 663 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 TOR4AQ9NXH8 423 aa19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 PLEKHB1Q9UF11 243 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 GPR55Q9Y2T6 319 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-225ENST00000600733 PCDHGB2Q9Y5G2 931 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms