RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 TBX19O60806 448 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 SLITRK5O94991 958 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PRPS2P11908 318 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 MC3RP41968 323 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 DNASE1L1P49184 302 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 TMED10P49755 219 aaKnown RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 DCAF7P61962 342 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PDE7AQ13946 482 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 NTRK2Q16620 822 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 KRTCAP3Q53RY4 240 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 TTMPQ5BVD1 217 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 GK5Q6ZS86 529 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 FAM47EQ6ZV65 393 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 TRIM42Q8IWZ5 723 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 FBXW8Q8N3Y1 598 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 OR5M3Q8NGP4 307 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 CIDECQ96AQ7 238 aaPredicted RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 LCORQ96JN0 433 aaPredicted RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 ATP6V1G3Q96LB4 118 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 FAM173AQ9BQD7 235 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 PNPOQ9NVS9 261 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 SH3BP4Q9P0V3 963 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
UPF1-205ENST00000598209 FREM3P0C091 2139 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 DNAJC13O75165 2243 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 ZNF407Q9C0G0 2248 aa12.76□□□□□ -0.37
UPF1-205ENST00000598209 A0A087WV62 115 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 FRG2CA6NGY1 282 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 SCAMP2O15127 329 aaKnown RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 ACOX3O15254 700 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 ASNA1O43681 348 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 SEMA7AO75326 666 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 NME6O75414 186 aaPredicted RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 AGFG2O95081 481 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 DRD5P21918 477 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 ABCD3P28288 659 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 HPCAL1P37235 193 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 PIGAP37287 484 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 PPICP45877 212 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 FBXW4P57775 412 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 PLGLB1Q02325 96 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 HSPB3Q12988 150 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 MAD2L1Q13257 205 aaPredicted RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 RPS6KA2Q15349 733 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 ATG16L1Q676U5 607 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 ZNF551Q7Z340 670 aaPredicted RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 R3HCC1LQ7Z5L2 792 aaKnown RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 DIDO1Q9BTC0 2240 aaKnown RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 NUF2Q9BZD4 464 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 MANSC1Q9H8J5 431 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 AKTIPQ9H8T0 292 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 FOLH1BQ9HBA9 442 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 THAP1Q9NVV9 213 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 CNIH4Q9P003 139 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 ATP6V1HQ9UI12 483 aa12.75□□□□□ -0.37
UPF1-205ENST00000598209 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 EIF3LQ9Y262 564 aaKnown RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 GPR55Q9Y2T6 319 aaPredicted RBP12.75□□□□□ -0.37
UPF1-205ENST00000598209 MYO7BQ6PIF6 2116 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 PLOD2O00469 737 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 TP53I11O14683 189 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 HS6ST1O60243 411 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 COQ9O75208 318 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 SNNO75324 88 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 ERN1O75460 977 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 PPM1BO75688 479 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 STSP08842 583 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 DDX5P17844 614 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 GPC1P35052 558 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 RPL3P39023 403 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 FRKP42685 505 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 PPIAP62937 165 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 EMX2Q04743 252 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 RBPJQ06330 500 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 PLCXD2Q0VAA5 305 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 ZNF155Q12901 538 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 PTGR1Q14914 329 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 SMU1Q2TAY7 513 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 GHDCQ8N2G8 530 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 GOLGA6L1Q8N7Z2 621 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 OR7A2PQ8NGA2 310 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 ZFP28Q8NHY6 868 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 SPPL2AQ8TCT8 520 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 OMA1Q96E52 524 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 ELP4Q96EB1 424 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 ZBED6CLQ96FA7 236 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 VSTM2LQ96N03 204 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 BTBD9Q96Q07 612 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 SH3GL2Q99962 352 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 TTTY12Q9BZ98 90 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 PROK2Q9HC23 129 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms